Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq431 309 6e-79
seq539 140 6e-28
>seq431
Length=155802
Score = 309 bits (342), Expect = 6e-79
Identities = 602/870 (69%), Gaps = 48/870 (6%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| || || |||||||| ||
Sbjct 43634 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCTGAAGAGATTGATCTC 43693
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415
||||||| || |||| | || |||||| | |||| ||| ||| ||
Sbjct 43694 TCCAAGGATCTCCACGACTGGAACA-ACCGTCTGAACAAGGACGAGCAGTACTTCATCTC 43752
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||| || |||||||| ||||| ||||| || ||||| | |
Sbjct 43753 CCACATTCTCGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAACCTCGTTGAGCG 43812
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||| ||||||||| ||||| || ||||||||||| |||||||| ||
Sbjct 43813 CTTCTCAGGCGAGGTGCAGATTCCCGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGAT 43872
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|| ||| | || ||||| || | ||||| | |||| |||||| ||| ||
Sbjct 43873 GGAAAACATCCATTCTGAAACCTATTCG---CTGCTAATTGACACCTACATCAAGGAGCC 43929
Query 42593 CGTCG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| ||| |||| | || ||||| ||||| || || || ||||||||| ||||
Sbjct 43930 C-TCGCAGCGCACATACCTATTCAATGCCATTGACACTATTCCCTGCATCCGTCGCAAGG 43988
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTA 42710
| |||||||| || || |||||| | | | | | | ||||| | | || | || ||
Sbjct 43989 CCGACTGGGCTCTGAAGTGGATC-ACCGACAAGGAGTCTACGTTTGCCCAGCGCCTAGTT 44047
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT- 42769
|||||| | || |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 44048 GCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGCCTTCGCCTCCATCTTCTGGCTG 44107
Query 42770 --CAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGAC 42827
||||| ||| || ||||| || || |||||||| ||||| ||||| | |||
Sbjct 44108 CGCAAGC--GTGGTCTC-ATGCCTGGTCTGACCTTCTCAAACGAGCTCATTTCTCGTGAC 44164
Query 42828 GAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GC 42885
||||| ||||| | |||||||| ||||| ||||||||| ||||| | |||| ||
Sbjct 44165 GAGGGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCG---CACCTAA---ACAACCGC 44218
Query 42886 CCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944
|| | ||||| | || | |||||||| || ||||| | ||||||||||||||||
Sbjct 44219 CCCAGCAAGGACCTAGTGCAAAAGATCATCACTGATGCCGTTGTGATCGAGAAGGAGTTC 44278
Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004
|| || || | || ||| ||| | || |||||| ||| || ||| |||||
Sbjct 44279 CTGACCGAGGCTCTTCCCTGCGGTCTGCTAGGAATGAACGCCGATCTGATGAAGCAGTAC 44338
Query 43005 ATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACG 43064
|| ||| || || |||| || || || | | ||| || || | | || |
Sbjct 44339 ATTGAGTTTGTTGCGGACCGCCTGCT-TG-----TTGCTCT-AG--GCAACGAAAAGGTG 44389
Query 43065 --CCGTG-------CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAAC 43115
||||| |||||||||||| ||||||||||||||| | | |||||||| |||
Sbjct 44390 TACCGTGCCACAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAAC 44449
Query 43116 TTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|| || |||||||| |||| || ||||||
Sbjct 44450 TTCTTTGAGAAGCGTGTCGGTGATTACCAG 44479
>seq539
Length=40911
Score = 140 bits (154), Expect = 6e-28
Identities = 830/1319 (63%), Gaps = 41/1319 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| |||||||| ||||| || | || |||||||||||||||| |||| || ||
Sbjct 16502 GTTGACCACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGATGTGTAGGG 16561
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
|||| || ||| |||||||||| ||||||| ||||| || || |||||||| | ||
Sbjct 16562 TTCGAAGCACTCATTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATGGGTGCAAC 16621
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATG--CGGAGTCTGAGCTCGTTCCAGTCC 244267
||| ||| || | || || ||| | || | || ||| ||||||||
Sbjct 16622 CAGAAGAGAATTGCGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAG--TCCAGTCC 16679
Query 244268 CACATGCC-CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
|||| | | | || ||| | | ||||||| |||||||||| | || |
Sbjct 16680 CACAGGTCACTAGGAGTCA---CAT-------CCCACATATCAAACTGCAAGATACCTTG 16729
Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT 244386
| ||| ||| ||||| ||||| | ||| | ||| || |||||| | || || |
Sbjct 16730 GGAGACAGGGGAACCCTCATAGGTTGAGTAAGTACCCTCCGTCTGGGCGAT-TTCCAT-T 16787
Query 244387 CTCGTCG--AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444
| | || ||||||| ||||||||| || || ||| ||||| | | ||| ||
Sbjct 16788 GAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTGCT 16847
Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
| | | | ||| || |||| | | ||| | || |||| ||||| || ||
Sbjct 16848 TCGGGGGATTCGAAAGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCA 16907
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
| || ||||| | ||| ||| ||||| | ||||| | || ||||| ||
Sbjct 16908 ACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTC 16967
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624
| || || | ||| |||||||| | | | ||| ||| ||| | |
Sbjct 16968 ACATCAATGATGCGGTTTAGGTTGCGAACAACAACTTGAGTGACTTCGTGTAGCTTTTTA 17027
Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684
||||| ||||| | ||| | | || ||| || || ||||| |
Sbjct 17028 AAGTCATACTC------ACCCTTG----TTGTAGTCC--ACGAAGGAAGGAAGGGCCAGA 17075
Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744
|| |||||||| || || ||||| || | | |||| || |||||| |||||
Sbjct 17076 GATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCACAATACTCGATAATCTCAGTGCAC 17135
Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804
||||| || |||||| || || | | |||||| |||| |||||| |||
Sbjct 17136 AGGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAATGGTCT 17195
Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864
||||| |||||||| || || ||||| |||||| | || | | | ||| ||
Sbjct 17196 TTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATGGCATACCACAGC 17255
Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924
| | |||||||| | ||||| | ||||| |||||| ||||| |||
Sbjct 17256 TTCTGGGCCTTGACAACCGTGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCC 17315
Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984
|| ||||| ||| || || | | ||||||||| |||||||||||| ||
Sbjct 17316 TCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTC 17375
Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044
|| || | | || || | || |||||| | |||| |||||| |||||| |||
Sbjct 17376 CAGTCCTCATTTTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAAT 17435
Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104
||||| | | | || ||| || |||||| | || || | || || |||
Sbjct 17436 AGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGCAAGTCGAGGAACTCGAAG 17495
Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164
|| || | ||||| ||||| | ||| | || | ||| || || |||||||| || |||
Sbjct 17496 ACATCAGCATGCCATGGCTCGAGGTAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCC 17555
Query 245165 TGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223
|||| || ||| || | |||||| | || || | || || || ||||| ||
Sbjct 17556 TGGT-CAACATAACGGGCAGTGTTGTTGAAAACACGTAGCATGGGAACGATACCGTTCGA 17614
Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT--- 245280
||||| || || ||||| | ||| || | | | | | | |||||||
Sbjct 17615 AGTACCGTTAGTACCAGCAATGTAAGAGCCAGTGGCAC---GAATAC-GGTGGACATTGA 17670
Query 245281 -GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
|| | ||||| || |||||| || | ||| || |||||| ||| || ||||
Sbjct 17671 GACCGATACCGCCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGC 17730
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398
|||| |||||||| ||||||| || || ||||| || |||| ||| | || ||||
Sbjct 17731 CCTCGATGCTGTCATCTTTCATGTCGACTAGGAAGCACGAAGACAACTGAGCCTGGGGG 17789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944322615042800
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