Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq431 125 2e-23
seq659 86.0 1e-11
>seq431
Length=155802
Score = 125 bits (138), Expect = 2e-23
Identities = 313/467 (67%), Gaps = 10/467 (2%)
Strand=Plus/Plus
Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGAAGGTATTCTGTTTTCCGGGAGT-T 243346
||||| |||| || || |||| | ||| || || || || || ||| |||| | |
Sbjct 44030 TTTGCCCAGCGCCTAGTTGCCTTTGC-TGCTGTCGAGGGCAT-CTTTTTCTCGGGTGCCT 44087
Query 243347 TCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 243406
|| | ||||||| |||||||| || ||| | |||||||| || | || ||||
Sbjct 44088 TCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACG 44147
Query 243407 AGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGC 243466
|| |||| ||| ||||||||||| ||| | || | | || ||| || ||
Sbjct 44148 AGCTCATTTCTCGTGACGAGGGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTC---GC 44204
Query 243467 TCCAGAACAAGCTACCATTCGAA-ACG--GTCAAACAAATCATCACAGAAGCAGTTGAAA 243523
|| ||||| | || | | || || || | |||||||| || || |||| |
Sbjct 44205 ACCTAAACAACCGCCCCAGCAAGGACCTAGTGCAAAAGATCATCACTGATGCCGTTGTGA 44264
Query 243524 ACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAAC 243583
||| ||||| ||| | ||| ||| |||| ||| | || | || |||||| | || |
Sbjct 44265 TCGAGAAGGAGTTCCTGACCGAGGCTCTTCCCTGCGGTCTGCTAGGAATGAACGCCGATC 44324
Query 243584 TCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGA 243643
| ||| |||||||| || || || || |||||| | | | || || || | || |
Sbjct 44325 TGATGAAGCAGTACATTGAGTTTGTTGCGGACCGCCTGCTTGTTGCTCTAGGCAACGAAA 44384
Query 243644 AAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAA 243703
| |||||| ||| |||||||| | ||| |||||| ||| ||||| || || |
Sbjct 44385 AGGTGTACCGTGCCACAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGA 44444
Query 243704 CTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTG 243750
|||||||||| || ||||||||| ||||||| || ||||||||
Sbjct 44445 CTAACTTCTTTGAGAAGCGTGTCGGTGATTACCAGAAGGCTGGTGTG 44491
>seq659
Length=28844
Score = 86.0 bits (94), Expect = 1e-11
Identities = 154/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 334136 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCG-CAGA--GGGGAACCCTTC 334192
||| || ||||| || ||| || |||| || ||| || | | | |||||| || ||
Sbjct 14277 GTCCAGGTCGTGCTCGACGAAAACAGTCTT---AACCTCGGACTGCTTGGGGAAGCCCTC 14221
Query 334193 AAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACA 334252
| ||| |||| || || ||||||||||| ||||| || | || || || || ||
Sbjct 14220 GACCTGTTCGTTGTTGATGGCACGCATCAGAGTGGATTTTCCGGAACCATTGGGACCGCA 14161
Query 334253 CAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCC 334312
|||||||||||| | |||||||||||| | | || | ||| || || || || |
Sbjct 14160 CAGACCGTAGCGCTGACCACGCTTCAGACGCAGGTGAGTCTGGTTAAGCAGGATCTTGGC 14101
Query 334313 ACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||| || || || || || || | ||||||||||||||
Sbjct 14100 ACCGTAGGCGAGGGAGAAAGTGCAGTTGCACAGATCCTCACC 14059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102860146436750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |