Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq539 136 5e-27
seq431 118 1e-21
>seq539
Length=40911
Score = 136 bits (150), Expect = 5e-27
Identities = 830/1321 (63%), Gaps = 19/1321 (1%)
Strand=Plus/Plus
Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974
||||| || || || ||| | | | ||||| |||| ||||| || || |||||||||
Sbjct 16515 AACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGATGTGTAGGGTTCGAAGCACTCA 16574
Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034
||||| |||| || || | ||| |||||| ||||||||||| | ||||| ||
Sbjct 16575 TTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATGGGTGCAACCAGAAGAGAATTG 16634
Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTG 114092
|| | ||| | | |||| ||||| || | |||||| | | | | || |
Sbjct 16635 CGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAGTCCAGTCCCACAGGTCA-CTAGG 16693
Query 114093 TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATG 114152
|| | | ||||||||||||||| | ||||||||||||| | || || |||||| | |
Sbjct 16694 AGTCACA-TCCCACATATCAAACTGCAAGATACCTTGGGAGACAGGGGAACCCTCATAGG 16752
Query 114153 TCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACA 114212
| ||| | ||||| || || | ||| || || || ||||| || |
Sbjct 16753 TTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGA 16812
Query 114213 TTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271
| || |||||||| | || | || | || | ||| ||| || || | | |||
Sbjct 16813 TGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTG-CTTCGGGGGATTCGAAAGGCATGCGG 16871
Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331
|| || |||| || | || || ||||| | ||||| || || || | |||
Sbjct 16872 AGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCAACACCAATGGGACGGTGGCGCATG 16931
Query 114332 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391
|| || |||| || || || || |||| ||| || | | ||||| ||
Sbjct 16932 TTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCAATGATGCGGTTTAGGTTG 16991
Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451
||||| | |||| ||| || ||||||| | ||| | | | | |
Sbjct 16992 CGAACAACAACTTGAGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAG 17051
Query 114452 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511
| || | ||||||||| | || || || || ||||||| ||| || ||
Sbjct 17052 TCCACGAAGGAAGGAAGGGCCAGAGATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCA 17111
Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571
||||| ||||| || || |||| ||||| || ||||| || | || || |||
Sbjct 17112 CAATACTCGATAATCTCAGTGCACAGGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGA 17171
Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631
|| ||| ||| || || |||||||||||| | || | || ||||| || |||
Sbjct 17172 TTGCTCTTGCGGTTGCAATGGTCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGG 17231
Query 114632 GACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 114690
| || ||||| || | ||| | | || | | || | ||| | | | || |||||
Sbjct 17232 GCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTG-ACAACCGTGCGACCGCGACCCTC 17290
Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750
|| |||||||||| || || || ||||||||||| || | || | | || ||
Sbjct 17291 CTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGG 17350
Query 114751 TGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809
|| || || ||||| | ||||| ||| | || | |||||||||||||||||| |
Sbjct 17351 -GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTTTTCTCAACACGCTTCATGAACA 17409
Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869
||| |||||| || || |||| || || ||| || ||||||| | || || |
Sbjct 17410 AGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGT 17469
Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929
| ||||| || | || || | || ||| || ||||| || || ||||| | || |
Sbjct 17470 TCTTGCGCAAGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAA 17529
Query 114930 TTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983
| || | | || ||| |||||| ||||| | || ||| || || |
Sbjct 17530 AGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAAA 17586
Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTAT 115043
| || ||||| |||| |||||| | || || || || || ||| ||| |
Sbjct 17587 CACGTAGCATGGGAACGATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAAGAGCCAG 17646
Query 115044 TGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 115103
|||| | | | |||| | | ||| ||||| || ||| ||| || || || |
Sbjct 17647 TGGCACGAATACGGTGGACATTGAGACCGATACCGCCAGCCATCTTGGAAATCATGGCAC 17706
Query 115104 ACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC 115163
| | |||| | |||| || || ||||| |||| | || | ||| |||||||
Sbjct 17707 AAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCTTTCATGTCGACTAGGAAGC 17766
Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223
| |||| || | | || |||||||| || ||||| || |||| ||||| |||
Sbjct 17767 ACGAAGACAACTGAGCCTGGGGGGTACCAGCATTAAAGAGCGTAGGTGATGCGTGAGTGA 17826
Query 115224 A 115224
|
Sbjct 17827 A 17827
>seq431
Length=155802
Score = 118 bits (130), Expect = 1e-21
Identities = 343/522 (66%), Gaps = 11/522 (2%)
Strand=Plus/Minus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| || ||||||||||| || ||||| || || |||||| ||| ||
Sbjct 44187 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCA 44128
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
||||||||||| ||||| || |||||| || | || | ||||||||| |||||
Sbjct 44127 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATG 44068
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCA 126223
||||| ||| || || |||| || |||| ||||| | |||| |||| |
Sbjct 44067 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG---TAGACTCCTTGTCGGTG 44011
Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283
| |||||||| ||||| | ||||| ||| || || | || | || || |
Sbjct 44010 ATCCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTG 43951
Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343
|| || | | | || || || |||||||| | || || || ||||| |||
Sbjct 43950 AATAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGTT 43891
Query 126344 TCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 126402
|| |||| ||| ||| || | ||| | ||||||| | || || ||| ||
Sbjct 43890 TCAGAATGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCACCGGGCCTCGGGAAT 43832
Query 126403 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462
||| ||||| | | || | | || || || || || ||||| || ||||
Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772
Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 126519
||| || || || || | ||||| | ||| || | || ||||| || | |||||
Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712
Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
||||| |||||||| |||||||| | ||| || ||||||||
Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCA 43670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597343108977400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |