Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq539 136 5e-27 seq431 118 1e-21 >seq539 Length=40911 Score = 136 bits (150), Expect = 5e-27 Identities = 830/1321 (63%), Gaps = 19/1321 (1%) Strand=Plus/Plus Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 ||||| || || || ||| | | | ||||| |||| ||||| || || ||||||||| Sbjct 16515 AACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGATGTGTAGGGTTCGAAGCACTCA 16574 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||||| |||| || || | ||| |||||| ||||||||||| | ||||| || Sbjct 16575 TTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATGGGTGCAACCAGAAGAGAATTG 16634 Query 114035 CGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTG 114092 || | ||| | | |||| ||||| || | |||||| | | | | || | Sbjct 16635 CGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAGTCCAGTCCCACAGGTCA-CTAGG 16693 Query 114093 TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATG 114152 || | | ||||||||||||||| | ||||||||||||| | || || |||||| | | Sbjct 16694 AGTCACA-TCCCACATATCAAACTGCAAGATACCTTGGGAGACAGGGGAACCCTCATAGG 16752 Query 114153 TCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACA 114212 | ||| | ||||| || || | ||| || || || ||||| || | Sbjct 16753 TTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGA 16812 Query 114213 TTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271 | || |||||||| | || | || | || | ||| ||| || || | | ||| Sbjct 16813 TGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTG-CTTCGGGGGATTCGAAAGGCATGCGG 16871 Query 114272 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 114331 || || |||| || | || || ||||| | ||||| || || || | ||| Sbjct 16872 AGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCAACACCAATGGGACGGTGGCGCATG 16931 Query 114332 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 114391 || || |||| || || || || |||| ||| || | | ||||| || Sbjct 16932 TTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCAATGATGCGGTTTAGGTTG 16991 Query 114392 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 114451 ||||| | |||| ||| || ||||||| | ||| | | | | | Sbjct 16992 CGAACAACAACTTGAGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAG 17051 Query 114452 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 114511 | || | ||||||||| | || || || || ||||||| ||| || || Sbjct 17052 TCCACGAAGGAAGGAAGGGCCAGAGATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCA 17111 Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 ||||| ||||| || || |||| ||||| || ||||| || | || || ||| Sbjct 17112 CAATACTCGATAATCTCAGTGCACAGGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGA 17171 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || ||| ||| || || |||||||||||| | || | || ||||| || ||| Sbjct 17172 TTGCTCTTGCGGTTGCAATGGTCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGG 17231 Query 114632 GACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 114690 | || ||||| || | ||| | | || | | || | ||| | | | || ||||| Sbjct 17232 GCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTG-ACAACCGTGCGACCGCGACCCTC 17290 Query 114691 CTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGG 114750 || |||||||||| || || || ||||||||||| || | || | | || || Sbjct 17291 CTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGG 17350 Query 114751 TGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809 || || || ||||| | ||||| ||| | || | |||||||||||||||||| | Sbjct 17351 -GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTTTTCTCAACACGCTTCATGAACA 17409 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGAT 114869 ||| |||||| || || |||| || || ||| || ||||||| | || || | Sbjct 17410 AGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGT 17469 Query 114870 TGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 | ||||| || | || || | || ||| || ||||| || || ||||| | || | Sbjct 17470 TCTTGCGCAAGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAA 17529 Query 114930 TTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATA 114983 | || | | || ||| |||||| ||||| | || ||| || || | Sbjct 17530 AGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAAA 17586 Query 114984 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTAT 115043 | || ||||| |||| |||||| | || || || || || ||| ||| | Sbjct 17587 CACGTAGCATGGGAACGATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAAGAGCCAG 17646 Query 115044 TGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGC 115103 |||| | | | |||| | | ||| ||||| || ||| ||| || || || | Sbjct 17647 TGGCACGAATACGGTGGACATTGAGACCGATACCGCCAGCCATCTTGGAAATCATGGCAC 17706 Query 115104 ACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC 115163 | | |||| | |||| || || ||||| |||| | || | ||| ||||||| Sbjct 17707 AAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCTTTCATGTCGACTAGGAAGC 17766 Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223 | |||| || | | || |||||||| || ||||| || |||| ||||| ||| Sbjct 17767 ACGAAGACAACTGAGCCTGGGGGGTACCAGCATTAAAGAGCGTAGGTGATGCGTGAGTGA 17826 Query 115224 A 115224 | Sbjct 17827 A 17827 >seq431 Length=155802 Score = 118 bits (130), Expect = 1e-21 Identities = 343/522 (66%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| || ||||||||||| || ||||| || || |||||| ||| || Sbjct 44187 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCA 44128 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||||||||| ||||| || |||||| || | || | ||||||||| ||||| Sbjct 44127 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATG 44068 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCA 126223 ||||| ||| || || |||| || |||| ||||| | |||| |||| | Sbjct 44067 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG---TAGACTCCTTGTCGGTG 44011 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | |||||||| ||||| | ||||| ||| || || | || | || || | Sbjct 44010 ATCCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTG 43951 Query 126284 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 || || | | | || || || |||||||| | || || || ||||| ||| Sbjct 43950 AATAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGTT 43891 Query 126344 TCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 126402 || |||| ||| ||| || | ||| | ||||||| | || || ||| || Sbjct 43890 TCAGAATGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCACCGGGCCTCGGGAAT 43832 Query 126403 CTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 126462 ||| ||||| | | || | | || || || || || ||||| || |||| Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772 Query 126463 AAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCA 126519 ||| || || || || | ||||| | ||| || | || ||||| || | ||||| Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712 Query 126520 GTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||| |||||||| |||||||| | ||| || |||||||| Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCA 43670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597343108977400