Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq576 111 2e-19
>seq576
Length=37320
Score = 111 bits (122), Expect = 2e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||||||||| | || || || || || |||||||| || |
Sbjct 12196 ACCACCACGCAGGCGGAGCACTAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 12137
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || ||||||||||| ||||| ||||||| ||||||||||| |||||
Sbjct 12136 CAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGCTGGTCCGGAGG 12077
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || || || ||| || || | ||||| | |||||
Sbjct 12076 AATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCCGAAGACTCCAC 12017
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421
|| | || | ||||||||||||||
Sbjct 12016 CTCGAGGGTGATGGTCTTGCCGGTCA 11991
Score = 111 bits (122), Expect = 2e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || ||||| || || |||||||| || | | |||||| |||| |||||||||
Sbjct 12455 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGC 12396
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| |||||| ||||||| |||||||| || ||||| || || || || || || || ||
Sbjct 12395 TTTCCGGCAAAAATGAGACGCTGCTGATCCGGAGGGATACCCTCCTTATCCTGGATCTTG 12336
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419
||| ||| || | |||||| || || ||||| | || | ||||||||||||
Sbjct 12335 GACTTGACATTGTCGATGGTATCAGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGT 12277
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | || || | ||||| || ||||| || || |||||||| || |
Sbjct 12708 ACCACCACGCAGACGCAGAACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGA 12649
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| |||| ||||||||||| || ||| | ||||| |||||||| || |||||
Sbjct 12648 GAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGG 12589
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | ||||| | || ||
Sbjct 12588 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATAGTATCCGAAGACTCGAC 12529
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| |||| || || || || ||||||||
Sbjct 12528 CTCGAGTGTAATAGTCTTGCCCGTCAGGGTCTTGACAAAGATTTGCAT 12481
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || | ||||| || ||||| || || |||||||| || | || |||||| | ||
Sbjct 12920 AGAACCAAATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCC 12861
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || ||||| || ||| | ||||| ||||||||||| ||||| || || || || ||
Sbjct 12860 TCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 12801
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | ||||| | || || || | || | |||
Sbjct 12800 TGGATCTTGGACTTGACATTGTCAATAGTATCCGAAGACTCGACCTCGAGTGTAATAGTC 12741
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| |||| || || || || ||||||||
Sbjct 12740 TTGCCCGTCAGGGTCTTGACAAAGATTTGCAT 12709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499636024988200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |