Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq539 138 1e-27
seq431 123 3e-23
>seq539
Length=40911
Score = 138 bits (152), Expect = 1e-27
Identities = 915/1455 (63%), Gaps = 27/1455 (2%)
Strand=Plus/Plus
Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935
||||| || || || ||| | | | |||||||||| ||||| || || |||||||||
Sbjct 16515 AACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGATGTGTAGGGTTCGAAGCACTCA 16574
Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995
||||| |||| || || | |||| |||||| ||||||||||| | ||||| |||
Sbjct 16575 TTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATGGGTGCAACCAGAAGAGAATTG 16634
Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTG 116053
|| | ||| | |||| ||||| || | |||||| | | | | || |
Sbjct 16635 CGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAGTCCAGTCCCACAGGTCA-CTAGG 16693
Query 116054 TCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATG 116113
|| | ||||||||||||||||| | |||||||||||| | || || |||||| | |
Sbjct 16694 AGTCACA-TCCCACATATCAAACTGCAAGATACCTTGGGAGACAGGGGAACCCTCATAGG 16752
Query 116114 TCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACA 116173
| || | ||||| || || | ||| || || || ||||| || |
Sbjct 16753 TTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGA 16812
Query 116174 TTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGG 116232
| || |||||||| | || | || | || | ||| ||| || || | | |||
Sbjct 16813 TGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTG-CTTCGGGGGATTCGAAAGGCATGCGG 16871
Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292
|| || |||| || | || || ||||| | ||||| || || || | |||
Sbjct 16872 AGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCAACACCAATGGGACGGTGGCGCATG 16931
Query 116293 TTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 116352
|| || |||| || || || || |||| ||| || | | ||||| ||
Sbjct 16932 TTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCAATGATGCGGTTTAGGTTG 16991
Query 116353 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 116412
||||| | |||| ||| || ||||||| | ||| | | | | |
Sbjct 16992 CGAACAACAACTTGAGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAG 17051
Query 116413 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 116472
| || | ||||||||| | || || || || ||||||| ||| || ||
Sbjct 17052 TCCACGAAGGAAGGAAGGGCCAGAGATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCA 17111
Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532
||||| ||||| || || |||| ||||| || ||||| || | || || |||
Sbjct 17112 CAATACTCGATAATCTCAGTGCACAGGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGA 17171
Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592
|| ||| ||| || || ||||| ||||| | || | || ||||| || |||
Sbjct 17172 TTGCTCTTGCGGTTGCAATGGTCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGG 17231
Query 116593 GACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC 116651
| || ||||| || | ||| | | || | | || | ||| | | | || |||||
Sbjct 17232 GCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTG-ACAACCGTGCGACCGCGACCCTC 17290
Query 116652 CTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTG 116710
|| |||||||||| || || |||||||||||||| || | ||| || | | || |
Sbjct 17291 CTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCC-ATAGCAATCCGCCAAGCCGG 17349
Query 116711 GTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAG 116769
| || || || || || | ||||| ||| | || | |||||| |||||||||||
Sbjct 17350 G-GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTTTTCTCAACACGCTTCATGAAC 17408
Query 116770 AGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 116829
| ||| |||||| || ||| |||| || || ||| || ||||||| | || ||
Sbjct 17409 AAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGG 17468
Query 116830 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 116889
|| ||||| || | || || | || ||| || ||||| || || ||||| | ||
Sbjct 17469 TTCTTGCGCAAGTCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCA 17528
Query 116890 ATTGACCC------CTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAAT 116943
| | || |||| ||| |||||| ||||| | || || ||| ||
Sbjct 17529 AAGGCTCCAGGTCGCTTG---TTTCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAA 17585
Query 116944 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTG 117003
|| || ||||| |||| |||||| | || || || || || ||| |||
Sbjct 17586 ACACGTAGCATGGGAACGATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAAGAGCCA 17645
Query 117004 TTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCG 117063
|||| | | | ||||| | | ||| ||||| || ||| ||| || || ||
Sbjct 17646 GTGGCACGAATACGGTGGACATTGAGACCGATACCGCCAGCCATCTTGGAAATCATGGCA 17705
Query 117064 CACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAG 117123
|| | |||| | |||| || || ||||| |||| | || | ||| ||||||
Sbjct 17706 CAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCTTTCATGTCGACTAGGAAG 17765
Query 117124 CAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATG 117183
|| |||| || | | || |||||||| || ||||| || |||| ||||| ||
Sbjct 17766 CACGAAGACAACTGAGCCTGGGGGGTACCAGCATTAAAGAGCGTAGGTGATGCGTGAGTG 17825
Query 117184 AACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACA-GAGGGAATGTCTTCCCCG 117240
| | | |||| |||||| | |||||| || | ||| | || | | || ||
Sbjct 17826 A--AGAACTTGCTGGACATAAAGTTGTAGGTTTCAAGCACACGTTCGACT-TTGTCACCC 17882
Query 117241 TGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCG 117300
|||||| | | || ||||| | ||||| ||||| ||| | | ||||||||
Sbjct 17883 CAAATACCCACAGCAACACGCATTATCATGTGCTGGGGACGTTCAACAATCTTACCATCG 17942
Query 117301 AGCCTCTGGAGGTAA 117315
|| || | ||||||
Sbjct 17943 AGTTTCAGTAGGTAA 17957
>seq431
Length=155802
Score = 123 bits (136), Expect = 3e-23
Identities = 345/523 (66%), Gaps = 11/523 (2%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || ||| || ||||||||||| || ||||| || || |||||| ||||||
Sbjct 44188 AGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACC 44129
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||||||||| ||||| || |||||| || | || | || ||||| |||||
Sbjct 44128 AGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGAT 44069
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATC 127695
||||| ||| || || |||| ||| |||| |||||| | |||| ||||
Sbjct 44068 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG---TAGACTCCTTGTCGGT 44012
Query 127696 AAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755
| |||||||| ||||| | ||||| ||| || || | || | || || |
Sbjct 44011 GATCCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATT 43952
Query 127756 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815
|| || | | | || || || |||||||| | || || || ||||| ||
Sbjct 43951 GAATAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGT 43892
Query 127816 TTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874
||| |||| ||| ||| || | ||| | ||||||| | || || ||| |
Sbjct 43891 TTCAGAATGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCACCGGGCCTCGGGAA 43833
Query 127875 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 127934
|||| ||||| | | || | | || || || || || ||||| || |||
Sbjct 43832 TCTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAG 43773
Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 127991
|||| || || || || | ||||| | ||| || | || ||||| || | ||||
Sbjct 43772 CAAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCC 43713
Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||||| ||||||||| |||||||| | ||| || ||||||||
Sbjct 43712 AGTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCA 43670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613496425279800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |