Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq431 257 2e-63
seq576 113 5e-20
seq1207 96.9 3e-15
seq492 91.5 1e-13
>seq431
Length=155802
Score = 257 bits (284), Expect = 2e-63
Identities = 497/729 (68%), Gaps = 11/729 (2%)
Strand=Plus/Minus
Query 132718 ACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCC 132777
|| ||||| | ||| || || ||||| ||||| ||| ||| ||| || | |||
Sbjct 44367 ACAAGCAGGCGGTCCGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCT 44308
Query 132778 AGCAGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836
||||||| ||| || || || ||||| || || | |||||| | || || || ||
Sbjct 44307 AGCAGACCGCAG-GGAAGAGCCTCGGTCAGGAACTCCTTCTCGATCACAACGGCATCAGT 44249
Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA 132896
|| ||| | || | || ||| || || | | ||| ||||| || |||
Sbjct 44248 GATGATCTTTTGCACTAGGTCCTTGCTGGGGCGGTTGTTTAGGTGCGAGAACAGCAGGCA 44189
Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956
|||||||||| |||| ||||||||| | |||||||| ||||| ||| |||| ||
Sbjct 44188 AGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACC 44129
Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016
|||||||| || || || ||||| || |||| |||||| ||||| || ||||
Sbjct 44128 AGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGAT 44069
Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076
||||||||| || || || || || ||||||| | | ||||| | || ||| || |||
Sbjct 44068 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTAGACTCCTTGTCGGTGAT 44009
Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136
||| ||| ||||| |||||||| || ||| || || || || ||||| || ||
Sbjct 44008 CCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTGAA 43949
Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACAT 133193
| || | | | ||||| | | ||||||||| || || |||||| |
Sbjct 43948 TA---GGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGT 43892
Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253
||| || || | ||| ||||| ||| || || ||||| |||||||| |||||| |
Sbjct 43891 TTCAGAATGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCGGGAAT 43832
Query 133254 CTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313
|||||| || | ||| ||||| || || ||||||||||||||||| || ||| ||
Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772
Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCA 133370
|| ||||| || | ||| |||||| | |||||| | ||||| || | |||
Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712
Query 133371 GTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430
|||| | |||||||| || || | ||| || | ||||| || || |||||||| ||
Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCAGAAGGAAGCCTCGGCCTT 43652
Query 133431 TTTGTACAT 133439
||||||||
Sbjct 43651 CTTGTACAT 43643
>seq576
Length=37320
Score = 113 bits (124), Expect = 5e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAA 38315
|| || || || || ||||| ||||||||| |||| |||||| || | || | | | |
Sbjct 12265 GTCAAGACCCTTACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACCATCGAC 12324
Query 38316 ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATT 38375
| | || || |||| || || ||||| || || | || || ||||| ||||||
Sbjct 12325 AATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTCATT 12384
Query 38376 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAA 38435
| || || || ||||| || |||| |||||||| ||||||||||||||| ||||||
Sbjct 12385 TTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAA 12444
Query 38436 GCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
| || || || ||||| |||||| || | || ||
Sbjct 12445 TCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 12479
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || |||||||| || || || |||| |||||| | |
Sbjct 12709 ATGCAAATCTTTGTCAAGACCCTGACGGGCAAGACTATTACACTCGAGGTCGAGTCTTCG 12768
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || || |||| ||||| ||||| || || | |||||
Sbjct 12769 GATACTATTGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 12828
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | || || || || || || || | ||||||||| |||||||||
Sbjct 12829 CAGCGTCTCATCTTTGCTGGAAAGCAACTCGAGGATGGTCGCACCCTCTCTGACTACAAC 12888
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||| |||||| | || || |||||||| |||||| || | || ||||
Sbjct 12889 ATCCAGAAGGAATCCACTCTTCATTTGGTTCTGCGTCTGCGTGGTGGCC 12937
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || || |||||||| || || || |||| |||||| | |
Sbjct 12481 ATGCAAATCTTTGTCAAGACCCTGACGGGCAAGACTATTACACTCGAGGTCGAGTCTTCG 12540
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || || |||| || || ||||| || || | || ||
Sbjct 12541 GATACTATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAG 12600
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | || || || ||||| || |||| ||||||||| |||||||||
Sbjct 12601 CAGCGTCTCATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCTGACTACAAC 12660
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| |||||| | || || |||||||| |||||| || | || ||
Sbjct 12661 ATCCAGAAGGAATCTACTCTTCATTTGGTTCTGCGTCTGCGTGGTGG 12707
Score = 105 bits (116), Expect = 7e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| ||||| ||||||||| |||| || ||| | | || | | | |||| ||||
Sbjct 11993 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGATACTATTGACAACG-TTAAGTC 12051
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| |||| ||||| ||||| ||||| | ||||| ||||| ||||||| ||| || ||
Sbjct 12052 TAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGCAGCGTCTCATTTTCGCCGGAAA 12111
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
||||| || || | |||||||| ||||||||||||||| ||||| | || || ||
Sbjct 12112 GCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCA 12171
Query 38447 TTTGGTGCTGCG 38458
| | ||||| ||
Sbjct 12172 TCTAGTGCTCCG 12183
>seq1207
Length=77990
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || || ||||| || || || ||| |||| || ||| ||
Sbjct 69067 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 69126
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | || || || | ||||| ||||| |||||| | |||
Sbjct 69127 TCGGACACTATCGACAATGTCAAGTCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 69186
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| |||||||| || | |||||||| ||||||
Sbjct 69187 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCTGACTAC 69246
Query 38421 AACATCCAAAAGG 38433
||||| || ||||
Sbjct 69247 AACATTCAGAAGG 69259
>seq492
Length=47418
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| | || |||||| | | |||| |
Sbjct 44550 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 44609
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| ||||| |||||| | ||||| ||||| |
Sbjct 44610 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTT 44668
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | || ||||| ||||| || || | ||||| || ||||||||||||||| ||
Sbjct 44669 GATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAA 44728
Query 38432 GGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| | || || || | || |||||
Sbjct 44729 GGAGTCCACTCTCCACCTTGTCCTGCG 44755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500164015715200
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