Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq819 178 2e-39
seq530 159 4e-34
>seq819
Length=99480
Score = 178 bits (196), Expect = 2e-39
Identities = 278/398 (70%), Gaps = 0/398 (0%)
Strand=Plus/Minus
Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522
|| |||||||||| || || || || ||||| | ||||| || |||||||| | ||
Sbjct 62282 TCCTCACCACCCAGATGGGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCGTCCTCG 62223
Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582
||| | | | ||| ||||| || |||||||||||||| || || || || |||||
Sbjct 62222 ATGGTCAGAAGCGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGGACGTTGCGC 62163
Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642
||| | || ||||| || |||||||| || || || || || || || || |||||
Sbjct 62162 TCGCCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTGGGCTCGTTAATG 62103
Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702
||||| || ||| ||||||||||| | | || || || || || || || ||
Sbjct 62102 ATACGCAGGACGTTGAGGCCAGCAATGAGACCAGAGTCCTTGGTAGCCTGACGCTGAGAG 62043
Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762
||||| |||||||| || || || | ||| |||| |||| | | || || || ||
Sbjct 62042 TCGTTGAAGTAGGCGGGAACAGTGATGACAGCGTTGTTGACGTCAGTGCCCAGGTAGGAC 61983
Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822
|| || | || ||| ||||| | |||||| || || |||||||||| | |||||
Sbjct 61982 TCGGCAGTCTCACGCATCTTGGTCAAAACCATGGAGGAGATCTCTTCAGGGGTGAACTGC 61923
Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
|| || ||||| || || || || || || || || ||
Sbjct 61922 TTGGTCTCACCCTTGAACTCGACCTCGATGATAGGCTT 61885
>seq530
Length=41375
Score = 159 bits (176), Expect = 4e-34
Identities = 380/572 (66%), Gaps = 13/572 (2%)
Strand=Plus/Minus
Query 7243 CAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG--AAATCAACGCCGTCGTATAAC 7300
||||||||| ||||| ||||| || || || | || || || | || ||| | |
Sbjct 25243 CAGTTCCTCGAAACGGGCACGAGTGATC--TGGACAGTGAAGTCCTCACCATCGAAGAGA 25186
Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360
|| || |||||||| || || || ||||| | || ||||| || ||||| ||
Sbjct 25185 CTGTCGATCTCAATGGTGGTCTGAGCACCGGAAGAAAGGGTACGCTTGGCACGCTCGCAA 25126
Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420
|| || || | |||||| |||||||| | | | ||| | || ||||| || ||
Sbjct 25125 GCAGTGCGGAGACGACGCAGGGCACGAGCATCAGAGGACAGGTCCTTCTTGGTCTTGCGG 25066
Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480
| || || | | ||| || || | | ||||| || | |||||||| |||
Sbjct 25065 GTGAAGTCCTTCTTGCAGTACTCCAGCAGGTTGGTGTCGAAGTCCTGACCACCCAGGTGA 25006
Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540
|| || || ||||| || ||||| |||| ||| || | |||||| | || || |||
Sbjct 25005 GTGTCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGAATGTTCAGCAGGGAGACA 24946
Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600
|| || |||||||| ||||| || | || || ||||| || | || | ||||
Sbjct 24945 TCGAAAGTACCACCGCCCAGATCGTAGATCAGGACGTTGCGCTCCTTCTC---GGACTTA 24889
Query 7601 TC------GAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
| ||||||||| || || || || || || || || || || ||||| ||| |
Sbjct 24888 CCAGCACCGAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCGTTGATGATACGCAGAACG 24829
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
||||||||||| || | | ||||| || || || || || || ||||| ||||||
Sbjct 24828 TTCAGGCCAGCGATGGCACCGGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAG 24769
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| ||||| || | ||| || | | || ||||| ||||| | | || || || ||
Sbjct 24768 GCAGGGACGGTGATGACAGCCTTCTCAACCTTCTTGCCGAGCTTGGCCTCAGCAATCTCC 24709
Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTC 7806
||||| || |||||||| || |||| |||
Sbjct 24708 TTCATCTTCAGCAGAACCATGGAAGAAACCTC 24677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635121645480200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |