Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq539 199 5e-46
seq431 107 2e-18
seq564 87.8 2e-12
seq1 82.4 9e-11
>seq539
Length=40911
Score = 199 bits (220), Expect = 5e-46
Identities = 1054/1656 (64%), Gaps = 53/1656 (3%)
Strand=Plus/Minus
Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764
|||| |||||| |||| || ||||| || |||||||| || | || ||||
Sbjct 17827 TTCACTCACGCATCACCTACGCTCTTTAATGCTGGTACCCCCCAGGCTCAGTTGTCTTCG 17768
Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824
|| ||||| | | | || || || ||| | |||||||||| || ||||
Sbjct 17767 TGCTTCCTAGTCGACATGAAAGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 17708
Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884
|||||| || || ||| |||||| |||||||| | | |||| | | | |||
Sbjct 17707 TGTGCCATGATTTCCAAGATGGCTGGCGGTATCGGTCTCAATGTCCACCGTATTCGTGCC 17648
Query 111885 AACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 111944
| ||| ||| ||||| || ||| || | ||||| |||| ||||| ||
Sbjct 17647 ACTGGCTCTTACATTGCTGGTACTAACGGTACTTCGAACGGTATCGTTCCCATGCTACGT 17588
Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA----- 111999
|| || ||| ||| || || ||||| |||| | ||| |||| || ||
Sbjct 17587 GTTTTCAACAACACTGCCCGTTATGTTGACCAGGGTGGAAA---CAAGCGACCTGGAGCC 17531
Query 112000 -TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 112058
| || | || || ||||||||||| || ||| || | |||||||| || |||||
Sbjct 17530 TTTGCCATTTACCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTGCGCAAG 17471
Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117
||||| || | || || | || ||| || || || |||| || || ||||| ||
Sbjct 17470 AACCACGGAAAGGAAGAAGTCCG-TGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 17412
Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGG 112176
| ||||||||| | |||||| | | || | ||| ||||| | || || | || |
Sbjct 17411 CTTGTTCATGAAGCGTGTTGAGAAAAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 17352
Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236
| ||||| | | ||| | || || |||||||| || || || ||||||||||
Sbjct 17351 C-CCCGGCTTGGCGGATTGCTATGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGA 17293
Query 112237 AAGAAAGTCGGGCGACTGCGACGGTG--CCAGCTGCCGATG-TGTGGAAAGCTATTCTCA 112293
| || |||| | | | || ||||| | || | || | ||||| | || |||||
Sbjct 17292 AGGAGGGTCGCG-GTC-GC-ACGGTTGTCAAGGCCCAGAAGCTGTGGTATGCCATTCTGG 17236
Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353
|| | || || |||||||| | || | ||||||||||||||| || |||| ||||
Sbjct 17235 AGGCCCAGACTGAGACTGGCAACCCTTTCATGCTTTACAAAGACCATTGCAACCGCAAGA 17176
Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413
| ||||| || ||| | ||| ||| || || ||||| || || || || | || |
Sbjct 17175 GCAATCAGAAAAATCTAGGTACCATCCGCAGCTCAAACCTGTGCACTGAGATTATCGAGT 17116
Query 112414 TTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG 112473
| | | || ||| |||||||| ||||| ||||| | || || || | |
Sbjct 17115 ATTGTGCCCCTGACGAGGTTGCTGTGTGCAACCTAGCATCTCTGGCCCTTCCTTCCTTCG 17056
Query 112474 TGGATCCAGAGACAAAG--ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGT 112531
|||| | | | |||| | | ||| | | |||| || |||||||| || || |||
Sbjct 17055 TGGA-CTACA-ACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACTCAAGTTGT 16998
Query 112532 CACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAA 112591
||||||||| | | |||||| ||| ||||| || || |||| ||
Sbjct 16997 TGTTCGCAACCTAAACCGCATCATTGATGTGAATCACTACCCTGTCCAGGAAGCTCACAA 16938
Query 112592 ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT 112651
|| ||| | |||||||| |||||| | ||||| || || | || |||| ||| |
Sbjct 16937 CAGCAACATGCGCCACCGTCCCATTGGTGTTGGTGTACAGGGCTTGGCTGATGCTTTCCT 16878
Query 112652 TCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTG 112710
| | || || || ||| || ||| |||||| | | || | || ||||
Sbjct 16877 T-GCTCTCCGCATGCCTTTCGAATCCCCCGAAGCACGCCAGCTTAACAAACAGATTTTTG 16819
Query 112711 AGACAATGTATCACGCCGCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTC 112767
| || || || |||||||| || || ||| ||| | || || || |||
Sbjct 16818 AAACCATCTACCACGCCGCACTAACTGC---TTCAATGGAAATCGCCCAGACGGAGGGTA 16762
Query 112768 CATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG 112827
| || ||||| ||||||||| || | || ||||| | | || |||||||||||||
Sbjct 16761 CTTACTCAACCTATGAGGGTTCCCCTGTCTCCCAAGGTATCTTGCAGTTTGATATGTGGG 16702
Query 112828 AAGGTGAGACCAAGCTTCAC---TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGA 112884
| |||| || || | || | |||||| |||| ||||| || || ||
Sbjct 16701 -ATGTGACTCCTAG--TGACCTGTGGGACTGGACTTCTCTGAAGGAGAAGATTAAACAGC 16645
Query 112885 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 112944
| ||| | || || |||| || | ||||| ||||| |||||| ||| | || ||
Sbjct 16644 ATGGTGTACGCAATTCTCTTCTGGTTGCACCCATGCCTACAGCCAGCACATCGCAGATTC 16585
Query 112945 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 113004
|||| || ||||| ||||| ||||||||||| | |||||||| | | | | || |
Sbjct 16584 TGGGCAACAATGAGTGCTTCGAACCCTACACATCCAACATCTACCAGCGCCGCGTTCTTG 16525
Query 113005 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 113064
| || ||||| | | |||||| ||| | |||||| || ||||| | |
Sbjct 16524 CTGGCGAGTTCCAGGTGGTCAACCCCTGGCTCCTACGTGACCTTGTCGATCTTGGTTTAT 16465
Query 113065 GGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATTG 113121
|||| | |||||||| | | || | | |||| ||| || ||||| || ||
Sbjct 16464 GGTCTGACAATATGAAGAACCGCA---TTATTGCGGACAATGGATCTATTCAGAACATCC 16408
Query 113122 TGGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAAT---CAAGATGA 113178
||||| | ||| ||||| ||||| || ||||||||||| | || |
Sbjct 16407 CTAGCATTCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAAATTTCCCAGCGTA 16348
Query 113179 AGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA 113238
| || | | ||||| || || |||||| |||||||| ||| || ||| |
Sbjct 16347 CAGTTG---TGCAAATGGCTGCTGACCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCT 16293
Query 113239 ATCTATT--CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTG 113296
| ||| |||| || ||| || ||| |||| || | |||||| | | | ||
Sbjct 16292 AAACATTCACATGAAAGATCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTG 16233
Query 113297 GAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 113332
||| |||||||| ||||| ||||| ||||| ||
Sbjct 16232 GAAACTAGGTCTCAAGACGGGCATGTACTACCTGCG 16197
>seq431
Length=155802
Score = 107 bits (118), Expect = 2e-18
Identities = 149/206 (72%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 102129 AAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGA 102185
|| || || |||||| |||||||| | |||| |||| | | ||||| ||||
Sbjct 43985 AAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTC---TACGTTTGCCCAGCGC 44041
Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245
|| | || ||||| ||| ||||| ||||| ||||| ||| ||||| | | || |
Sbjct 44042 CTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGCCTTCGCCTCCATCTTC 44101
Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305
||||| ||||| ||||||||||| ||||| |||||| |||||||| || ||||||
Sbjct 44102 TGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTCATTTCTCGT 44161
Query 102306 GACGAGGGACTCCACCAAGAGTTTGC 102331
|||||||| || ||| || |||||
Sbjct 44162 GACGAGGGCCTGCACACCGACTTTGC 44187
>seq564
Length=132701
Score = 87.8 bits (96), Expect = 2e-12
Identities = 213/319 (67%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124
||||||||||| ||||| |||| ||||||||| || | ||| || |||| |||
Sbjct 130105 GCATCAATCTCGTCAATAAAGATGATGCATGGCGCGTTCTTGCGCGCCGTAGCAAAAAGA 130046
Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG-GAACA 16183
|| || || ||| | |||||| || ||||||||||| ||||| | | | || |||
Sbjct 130045 TCACGCACTCGCGACGGGCCCACGCCGACAAACATCTCGACAAACTCGGAGCCGCTGACA 129986
Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243
| || |||||| || || || || || |||| || || || ||||| |||||
Sbjct 129985 CT-GAAGAAGGGAACGCCTGACTCGCCAGCCGTGGCCTTTGCTAGCAGCGTCTTGCCCGT 129927
Query 16244 ACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---ACTTCCAAAGTA 16300
|| || |||| |||| || || || || |||||||| || || |||| |
Sbjct 129926 TCCCGGGGGGCCCGATAGGATAGCGCCACGCGGGATCTTGGCACCCAGACGCACAAACT- 129868
Query 16301 TCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAAT 16360
| || || | ||| || || | ||||| ||| | || | ||||| | || ||
Sbjct 129867 --TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATCTCGACCTTGGCCTCATCCAT 129810
Query 16361 CCCCTCAACATCGGTAAAC 16379
||| | ||||||| ||||
Sbjct 129809 CCCAGCCACATCGGCAAAC 129791
>seq1
Length=236255
Score = 82.4 bits (90), Expect = 9e-11
Identities = 165/242 (68%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 163548 ATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGG 163607
|||| || | || || || || || || |||| |||||| ||| | || || |
Sbjct 196607 ATGGCCGCATCGCCCCCCGCTCCGGCCTGGCTGCTAAACACTTCATCGATACCGGAGCTG 196548
Query 163608 GTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACA 163667
|||| |||||| |||| ||| ||||| ||||| || | | |||||||| |||
Sbjct 196547 GTGTCATTGATGCCGATTACCGTGGTGAGGTCAAGGTTCTCTTGTTCAATCACCACGACG 196488
Query 163668 AAGACTTTGAGGT-AAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGAGGTGTGAG 163726
||||| ||||| |||||||| | | |||||||| || || || | || | ||
Sbjct 196487 CCGACTTCGAGGTCAAAGAGGGCG-ACCGCATCGCTCAGCTAGTGTTGGAACGTATTGTA 196429
Query 163727 ACACCCGATGTGGAGGAAATTGGTCTCCTTGAAGAGACGGAGAGGGGTGCGGGTGGTTTT 163786
|| |||||||| | || ||| | | |||||||||| | | || || |||||||||
Sbjct 196428 ACTCCCGATGTTGTCGAGGTTGCTGTTCTTGAAGAGAGTGTCCGTGGAGCTGGTGGTTTT 196369
Query 163787 GG 163788
||
Sbjct 196368 GG 196367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620731498211600
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