Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq539 163 3e-35
seq564 116 4e-21
seq431 89.7 6e-13
>seq539
Length=40911
Score = 163 bits (180), Expect = 3e-35
Identities = 616/954 (65%), Gaps = 23/954 (2%)
Strand=Plus/Plus
Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340
|| || || | ||| || || |||||||||| | |||||| | | || || | |
Sbjct 17064 GGAAGGGCCAGAGATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCACAATACTCGATA 17123
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
|| || || |||| ||| || || ||| ||| | || |||||||| ||| |
Sbjct 17124 ATCTCAGTGCACAGGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGATTGCTCTTGCGG 17183
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
||||| || || || |||||| | ||| | ||||| || ||||| | || ||||||
Sbjct 17184 TTGCAATGGTCTTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATG 17243
Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
|| | ||| | | || | ||| |||| | | | || |||| |||| |||||||||
Sbjct 17244 GCATACCACAGCTTCTG-GGCCTTGACAACCGTGCGACCGCGACCCTCCTTCTCGTACTT 17302
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGG 110578
|||| ||||||| || | || || ||| | | | || || || | ||
Sbjct 17303 TTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGG 17361
Query 110579 GACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCC 110638
| || | ||| | ||| | || | |||||| | ||||||||||| ||| ||||
Sbjct 17362 GGCACATGAGAGTCCAGTCCTCATTTTTCTCAACACGCTTCATGAACAAGTCGCAGATCC 17421
Query 110639 ACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCT 110698
||| ||| |||| |||||||| ||| | ||||| | || ||||| ||| | |
Sbjct 17422 ACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGCAAGT 17481
Query 110699 CCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTAC 110758
| | || || | || ||| | |||||||| ||||| || | || | || ||| |
Sbjct 17482 CGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAAAGGCTCC---AG 17538
Query 110759 GACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812
| || || |||||| |||||| || || ||| ||||| || | ||||| |
Sbjct 17539 GTCGCTTGTTTCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAAACACGTAGCATGG 17598
Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGT 110872
||| || || | || ||| || ||||| ||| || | ||||||||||
Sbjct 17599 GAACGATACCGTTCGAAGTACCGTTAGTACCAGCAATGTAAGAGCCAGTGGCACGAATAC 17658
Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGT 110931
||||| || | ||| ||||| || ||| ||| ||| |||| | ||| ||||
Sbjct 17659 GGTGGACATTGAGACCGATACCGCCAGCCATCTTGGAAATCATGGCACAAGTCT-TGAGG 17717
Query 110932 GTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATC 110991
||| | ||||| || || || || | || || | | ||| ||||| ||||||| |
Sbjct 17718 GTATCGTAAATGCCCTCGATGCTGTCATCTTTCATGTCGACTAGGAAGCACGAAGACAAC 17777
Query 110992 TGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG- 111050
|||| | || || || ||||| ||||| ||||||| || ||| ||| ||| ||||
Sbjct 17778 TGAGCCTGGGGGGTACCAGCATTAAAGAGCGTAGGTGATGCGTGAGTGA--AGAACTTGC 17835
Query 111051 -GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACCAAT 111107
|||||| |||||| || || | || | | | || | | ||| |||||| |
Sbjct 17836 TGGACATAAAGTTGTAGGTTTCAA--GCACACGTTCGACTTTGTCACCCCAAATACCCAC 17893
Query 111108 GGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAG 111167
||||| ||||| | ||| | || || ||| | | ||| ||||| | | | ||
Sbjct 17894 AGCAACACGCATTATCATGTGCTGGGGACGTTCAACAATCTTACCATCGAGTTTCAGTAG 17953
Query 111168 GTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221
|||| ||| || ||||| | |||||||| | | ||| ||||||||
Sbjct 17954 GTAAGAACGCTCAAGAGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGATC 18007
Score = 123 bits (136), Expect = 3e-23
Identities = 315/477 (66%), Gaps = 12/477 (3%)
Strand=Plus/Plus
Query 109369 TCTAAACTAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATACCCGTT 109428
|||| | | |||||||| ||| ||| |||| || || || || ||||| |||||
Sbjct 16158 TCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGCAGGTAGTACATGCCCGTC 16217
Query 109429 TTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTTTGGAAAGTGTCGGACTC 109488
|||||||| ||||| || | ||||| | || ||| | || |||
Sbjct 16218 TTGAGACCTAGTTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGATCT 16277
Query 109489 TCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATG 109548
| ||| | ||| | ||||| || || || ||||| |||||| ||||| |||||
Sbjct 16278 TTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGGTCAGCAGCCATT 16337
Query 109549 TCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCA 109605
| | | ||| || || ||||||||| || |||||||||| | || ||||||
Sbjct 16338 TGCACAACTGTACGCT---GGGAAATTTCCCAAACGGTCTTGTACAGAGCTTTAATATCA 16394
Query 109606 TCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATC 109665
| |||||| |||||| |||||||| ||| || | ||| | | ||||||
Sbjct 16395 GCAGGAATGCTAGGGATGTTCTGAATAGATCCATTGTCCGCAATAATGCGGTTCTTCATA 16454
Query 109666 TCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTGACCACG 109722
| | ||||| | ||| | | || | |||| || || | ||||||||
Sbjct 16455 TTGTCAGACCATAAACCAAGATC---GACAAGGTCACGTAGGAGCCAGGGGTTGACCACC 16511
Query 109723 ACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACAC 109782
|| || |||||||| ||| || |||||||||| | |||||||||||||| |||
Sbjct 16512 TGGAACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGATGTGTAGGGTTCGAAGCAC 16571
Query 109783 TCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGA 109839
||||||||||| || || || | ||| ||||| |||||||| || | ||||||
Sbjct 16572 TCATTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATGGGTGCAACCAGAAGA 16628
>seq564
Length=132701
Score = 116 bits (128), Expect = 4e-21
Identities = 311/465 (67%), Gaps = 24/465 (5%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|||||||| ||||| || | | || || | ||| || | ||| | ||||| || ||
Sbjct 130291 CGATCGAATCGACCGGGTCTCATCAGCGCCTTATCCAGGACATCAGCGCGGTTGGTGCCG 130232
Query 11563 GCAATGACTACAAT--GCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|| | ||| || || || | | ||| ||| || |||||||| || || | |||||
Sbjct 130231 GCCAGGACGACGATTTGCTCGGCGG--TGTTGAAGCCATCCATTTCAGTCAGGATCTGGT 130174
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCAC-CTGCCGAA--CGCTTCTT-- 11675
| | ||| ||||||||||||||| | | ||| | | | | |||||||
Sbjct 130173 TCAGCGTGGACTCACGCTCATCGTTGCCA--CCTCCCATGCGGTTGGAGTCGCTTCTGGA 130116
Query 11676 ---ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732
||| | ||| |||||||| || || || | ||| || || ||| || |||
Sbjct 130115 GCGACCAATAGCATCAATCTCGTCAATAAAGATGATGCATGGCGCGTTCTTGCGCGCCGT 130056
Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792
| ||||| ||||| || ||| || || || || || |||||||| || || | |
Sbjct 130055 AGCAAAAAGATCACGCACTCGCGACGGGCCCACGCCGACAAACATCTCGACAAACTCGGA 129996
Query 11793 G--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGA 11850
| || || ||||||| ||||||||| ||||| ||||| |||| || || ||
Sbjct 129995 GCCGCTGA-CACTGAA-GAAGGGAACGCCTGACTCGCCAGCCGTGGCCTTTGCTAGCAGC 129938
Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC---A 11907
||||| ||||| || || | || | || | |||||||| |||||||||||||| |
Sbjct 129937 GTCTTGCCCGTTCCCGGGGGGCCCGATAGGATAGCGCCACGCGGGATCTTGGCACCCAGA 129878
Query 11908 CTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
| |||| | || |||||||||||||| | ||||| ||||
Sbjct 129877 CGCACAAACT---TTTCGGGCTTCTTGAGGAACTGCACAAACTCC 129836
>seq431
Length=155802
Score = 89.7 bits (98), Expect = 6e-13
Identities = 349/540 (65%), Gaps = 23/540 (4%)
Strand=Plus/Minus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|| ||||| || | ||| || ||||| || ||||| || |||| |||||||| |||||
Sbjct 44475 TAATCACCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTCCATG 44416
Query 119268 AAGTCAAAAGGATTTTTGGA---GTTC-CAGATTGGTGG--TTGACCAACTTGTTTCAGA 119321
||||| || || ||| ||| || | | || || | | || |||| ||
Sbjct 44415 AAGTCGAAGGGGTTTGTGGCACGGTACACCTTTTCGTTGCCTAGAGCAACA------AGC 44362
Query 119322 AGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGA 119381
|| || || | ||| |||| || || | |||| || | ||||| |||| |||
Sbjct 44361 AGGCGGTCCGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCAGA 44302
Query 119382 TTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATG 119441
|| || ||||| ||| | ||| | |||||||||| | || || || | | |||
Sbjct 44301 CCGCAGGGAAGAGCCTCGGTCAGGAACTCCTTCTCGATCACAACGGCATCAGTGATGATC 44242
Query 119442 GAGTGAA-TAGTTTCTGTCGATGGT--TTGTTTCTCAAGAGTTTAAACAACTCTACGGCA 119498
|| | ||| | || | || |||||| | | | |||| | |||
Sbjct 44241 TTTTGCACTAGGTCCTTGCTGGGGCGGTTGTTT---AGGTGCGAGAACAGCAGGCAAGCA 44185
Query 119499 AATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGC 119558
|| || || || || || || ||||| |||||||| || |||| || ||||||
Sbjct 44184 AAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCAGGC 44125
Query 119559 ATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCC 119618
||||| || | || ||||| ||||||| || || || || |||||||||
Sbjct 44124 ATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATGCCC 44065
Query 119619 TCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCA 119674
|| ||| || || || | ||| |||| || ||| || || |||||| || |||
Sbjct 44064 TCGACAGCAGCAAAGGCAACTAGGCGCTGGGC-AAACGTAGACTCCTTGTCGGTGATCCA 44006
Query 119675 CTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734
||| |||||||||| |||||| || |||||||| | ||| | ||||| | ||| ||
Sbjct 44005 CTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTGAATAG 43946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588965656109000
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