Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq539 140 4e-28
seq431 100 3e-16
seq1 89.7 6e-13
>seq539
Length=40911
Score = 140 bits (154), Expect = 4e-28
Identities = 1027/1641 (63%), Gaps = 23/1641 (1%)
Strand=Plus/Plus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|| || |||||||| || |||||||| ||| ||||||| || | ||||| | |
Sbjct 16197 CGCAGGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCGGCAAAGTGCATGCTGGTG 16256
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
| |||| ||| || ||| || |||| || || | | || |||||||||||
Sbjct 16257 ATCTTGCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAA 16316
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766
|||||| | || ||||| | | || | | || | |||||||| || ||
Sbjct 16317 GCACCACGGTCAGCAGCCATTTGCA---CAACTGTACGCTGGGAAATTTCCCAAACGGTC 16373
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||| ||| || |||||| | || || | ||| || ||||| || || ||
Sbjct 16374 TTGTACAGAGCTTTAATATCAGCAGGAATGCTAGGGATGTTCTGAATAGATCCATTGTCC 16433
Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886
| ||| | | |||||||| | ||||| | ||||| | || ||| | |
Sbjct 16434 GCAATAATGCGGTTCTTCATATTGTCAGACCATAAACCAAGATCGACAAGGTCACGTAGG 16493
Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946
|| |||||| | | ||||| || || || | | | | |||||||| |
Sbjct 16494 AGCCAGGGGTTGACCACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGAT 16553
Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006
||||||||||| ||||| ||||| || |||| || || | ||| |||||| |||||
Sbjct 16554 GTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATG 16613
Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066
||||| | || |||| || || | ||| | | || || ||||| ||| | |
Sbjct 16614 GGTGCAACCAGAAGAGAATTGCGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAGTC 16673
Query 106067 CAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124
||||| | | | | || || |||| | ||||||||||||| || | | |||||||
Sbjct 16674 CAGTCCCACAGGTCA-CTAGGAGTCACAT-CCCACATATCAAACTGCAAGATACCTTGGG 16731
Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184
| || ||||||||| | || || | ||| | | | || | ||| |
Sbjct 16732 AGACAGGGGAACCCTCATAGGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAG 16791
Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244
| || | ||||| || ||||||||||| || | || | || |||||
Sbjct 16792 CAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTGCTTCGG 16851
Query 106245 CTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303
|| || ||| || | |||| || || |||| || | || || ||||| | |
Sbjct 16852 GGGATTCGAAAGGCAT-GCGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCAACA 16910
Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363
||||| || | ||| ||||| || || | || || || || || |||
Sbjct 16911 CCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACA 16970
Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423
||||||| |||||||| || ||||| | |||| ||| || || |||| | |
Sbjct 16971 TCAATGATGCGGTTTAGGTTGCGAACAACAACTTGAGTGACTTCGTGTAGCTTTTTAAAG 17030
Query 106424 TCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 106483
||| | | | | | | || | |||||||| | ||||| | |||||
Sbjct 17031 TCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCCAGAGATGCTAGGTTGCAC 17090
Query 106484 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTA 106543
||||| ||| || | ||||| | ||| || || |||| ||| || ||
Sbjct 17091 ACAGCAACCTCGTCAGGGGCACAATACTCGATAATCTCAGTGCACAGGTTTGAGCTGCGG 17150
Query 106544 ATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAG 106603
|| || || | ||| || || || ||||| |||||| || ||||| |||||| |
Sbjct 17151 ATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAATGGTCTTTGTAAAGCATGAAA 17210
Query 106604 GGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTAC 106662
|| | || ||||| ||||| | || ||||| || | ||||| | || | | || | ||
Sbjct 17211 GGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTG-AC 17269
Query 106663 AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722
|| | | | || |||||| |||||||||| || || || |||||||| || ||
Sbjct 17270 AACCGTGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCC 17329
Query 106723 CACCGCG-TCGGAGAGACCTGGTGCCTTGTCTGGA-CAGAAAAGAGACCATTGACCACCC 106780
| || || | | || || || || ||| || | |||| ||| | ||
Sbjct 17330 -ATAGCAATCCGCCAAGCCGGG-GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTT 17387
Query 106781 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CA 106839
| |||||| ||||||||||| | ||| |||||||||| | || || || | | ||
Sbjct 17388 TTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCA 17447
Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899
| || | ||||| | || ||||| || || || |||||||| | || ||| || ||
Sbjct 17448 CGGA-CTTCTTCCTTTCCGTGGTTCTTGCGCAAGTCGAGGAACTCGAAGACATCAGCATG 17506
Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATA 106956
||||||||| || || | || | | ||| ||| ||| | || | |||||
Sbjct 17507 CCATGGCTCGAGGTAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATA 17566
Query 106957 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 107016
|| || ||| ||| || || || ||||| |||| ||||| | || ||| || ||
Sbjct 17567 ACGGGCAGTGTTGTTGAAAACACGTAGCATGGGAACGATACCGTTCGAAGTACCGTTAGT 17626
Query 107017 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 107076
|| ||| ||| | |||| | | | |||| | | || ||||| |||||
Sbjct 17627 ACCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGGACATTGAGACCGATACCGCCAGC 17686
Query 107077 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 107136
| ||| || || ||||| | | || || | || || || | ||| ||| ||
Sbjct 17687 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATC 17746
Query 107137 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 107196
|| || ||| |||||||| |||| ||| | || ||||||||||| |||||
Sbjct 17747 TTTCATGTCGACTAGGAAGCACGAAGACAACTGAGCCTGGGGGGTACCAGCATTAAAGAG 17806
Query 107197 GGTTGGTGTTGCGTGAATGAA 107217
|| |||| ||||||| ||||
Sbjct 17807 CGTAGGTGATGCGTGAGTGAA 17827
>seq431
Length=155802
Score = 100 bits (110), Expect = 3e-16
Identities = 339/522 (65%), Gaps = 11/522 (2%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| || ||||| || || ||||| || || ||||||||| || ||
Sbjct 44187 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCA 44128
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||||||||| ||||| || ||| | || | | ||| | || ||||| |||||
Sbjct 44127 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATG 44068
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACT--TTGT-GTCA 117450
||||| ||| ||||| |||| ||||||| ||| || | ||||| |||| |
Sbjct 44067 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG---TAGACTCCTTGTCGGTG 44011
Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 117510
| ||| |||| ||||| | ||||| || || || | ||| | ||||| |
Sbjct 44010 ATCCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTG 43951
Query 117511 AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTT 117570
|||| | | | || ||||| ||||| ||||||| | ||||| |||
Sbjct 43950 AATAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGTT 43891
Query 117571 TCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTAT 117629
|| ||| | ||| ||| ||| | || | ||||||| | || || ||| ||
Sbjct 43890 TCAGAATGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAGCACCGGGCCTCGGGAAT 43832
Query 117630 CTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 117689
|||||| || | | || | | || || || || || ||||| || ||||
Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772
Query 117690 AAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCA 117746
|||||| || || |||| ||||| | || || | | |||| || | |||||
Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712
Query 117747 GTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCA 43670
>seq1
Length=236255
Score = 89.7 bits (98), Expect = 6e-13
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 155098 GGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 155157
|| || ||||| |||||| |||| || ||||| ||||| || | | |||||||||
Sbjct 196554 GGAGCTGGTGTCATTGATGCCGATTACCGTGGTGAGGTCAAGGTTCTCTTGTTCAATCAC 196495
Query 155158 GGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217
||| ||||| ||||| || | || || |||||||| || || || | || ||
Sbjct 196494 CACGACGCCGACTTCGAGGTCAAAGAGGGCGACCGCATCGCTCAGCTAGTGTTGGAACGT 196435
Query 155218 TGTGAAACACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACAGAGAGAGGTGCGGGT 155277
|| ||| |||||||| | || ||| |||||||||||||| | | || || |||
Sbjct 196434 ATTGTAACTCCCGATGTTGTCGAGGTTGCTGTTCTTGAAGAGAGTGTCCGTGGAGCTGGT 196375
Query 155278 GGATTTGGATCTACTGGCGCCT 155299
|| ||||| ||||||| ||
Sbjct 196374 GGTTTTGGTAGCACTGGCGGCT 196353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589970438462200
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