Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq539 140 4e-28 seq431 100 3e-16 seq1 89.7 6e-13 >seq539 Length=40911 Score = 140 bits (154), Expect = 4e-28 Identities = 1027/1641 (63%), Gaps = 23/1641 (1%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 || || |||||||| || |||||||| ||| ||||||| || | ||||| | | Sbjct 16197 CGCAGGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCGGCAAAGTGCATGCTGGTG 16256 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 | |||| ||| || ||| || |||| || || | | || ||||||||||| Sbjct 16257 ATCTTGCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAA 16316 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTG 105766 |||||| | || ||||| | | || | | || | |||||||| || || Sbjct 16317 GCACCACGGTCAGCAGCCATTTGCA---CAACTGTACGCTGGGAAATTTCCCAAACGGTC 16373 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826 ||| ||| || |||||| | || || | ||| || ||||| || || || Sbjct 16374 TTGTACAGAGCTTTAATATCAGCAGGAATGCTAGGGATGTTCTGAATAGATCCATTGTCC 16433 Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886 | ||| | | |||||||| | ||||| | ||||| | || ||| | | Sbjct 16434 GCAATAATGCGGTTCTTCATATTGTCAGACCATAAACCAAGATCGACAAGGTCACGTAGG 16493 Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946 || |||||| | | ||||| || || || | | | | |||||||| | Sbjct 16494 AGCCAGGGGTTGACCACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGAT 16553 Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||||||||| ||||| ||||| || |||| || || | ||| |||||| ||||| Sbjct 16554 GTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATG 16613 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 ||||| | || |||| || || | ||| | | || || ||||| ||| | | Sbjct 16614 GGTGCAACCAGAAGAGAATTGCGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAGTC 16673 Query 106067 CAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 ||||| | | | | || || |||| | ||||||||||||| || | | ||||||| Sbjct 16674 CAGTCCCACAGGTCA-CTAGGAGTCACAT-CCCACATATCAAACTGCAAGATACCTTGGG 16731 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184 | || ||||||||| | || || | ||| | | | || | ||| | Sbjct 16732 AGACAGGGGAACCCTCATAGGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAG 16791 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | || | ||||| || ||||||||||| || | || | || ||||| Sbjct 16792 CAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTGCTTCGG 16851 Query 106245 CTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 || || ||| || | |||| || || |||| || | || || ||||| | | Sbjct 16852 GGGATTCGAAAGGCAT-GCGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCAACA 16910 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTG 106363 ||||| || | ||| ||||| || || | || || || || || ||| Sbjct 16911 CCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACA 16970 Query 106364 TCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAA 106423 ||||||| |||||||| || ||||| | |||| ||| || || |||| | | Sbjct 16971 TCAATGATGCGGTTTAGGTTGCGAACAACAACTTGAGTGACTTCGTGTAGCTTTTTAAAG 17030 Query 106424 TCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 106483 ||| | | | | | | || | |||||||| | ||||| | ||||| Sbjct 17031 TCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCCAGAGATGCTAGGTTGCAC 17090 Query 106484 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTA 106543 ||||| ||| || | ||||| | ||| || || |||| ||| || || Sbjct 17091 ACAGCAACCTCGTCAGGGGCACAATACTCGATAATCTCAGTGCACAGGTTTGAGCTGCGG 17150 Query 106544 ATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAG 106603 || || || | ||| || || || ||||| |||||| || ||||| |||||| | Sbjct 17151 ATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAATGGTCTTTGTAAAGCATGAAA 17210 Query 106604 GGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTAC 106662 || | || ||||| ||||| | || ||||| || | ||||| | || | | || | || Sbjct 17211 GGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATGGCATACCACAGCTTCTGGGCCTTG-AC 17269 Query 106663 AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 || | | | || |||||| |||||||||| || || || |||||||| || || Sbjct 17270 AACCGTGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCC 17329 Query 106723 CACCGCG-TCGGAGAGACCTGGTGCCTTGTCTGGA-CAGAAAAGAGACCATTGACCACCC 106780 | || || | | || || || || ||| || | |||| ||| | || Sbjct 17330 -ATAGCAATCCGCCAAGCCGGG-GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTT 17387 Query 106781 TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CA 106839 | |||||| ||||||||||| | ||| |||||||||| | || || || | | || Sbjct 17388 TTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCA 17447 Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899 | || | ||||| | || ||||| || || || |||||||| | || ||| || || Sbjct 17448 CGGA-CTTCTTCCTTTCCGTGGTTCTTGCGCAAGTCGAGGAACTCGAAGACATCAGCATG 17506 Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATA 106956 ||||||||| || || | || | | ||| ||| ||| | || | ||||| Sbjct 17507 CCATGGCTCGAGGTAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATA 17566 Query 106957 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 107016 || || ||| ||| || || || ||||| |||| ||||| | || ||| || || Sbjct 17567 ACGGGCAGTGTTGTTGAAAACACGTAGCATGGGAACGATACCGTTCGAAGTACCGTTAGT 17626 Query 107017 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 107076 || ||| ||| | |||| | | | |||| | | || ||||| ||||| Sbjct 17627 ACCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGGACATTGAGACCGATACCGCCAGC 17686 Query 107077 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 107136 | ||| || || ||||| | | || || | || || || | ||| ||| || Sbjct 17687 CATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATC 17746 Query 107137 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 107196 || || ||| |||||||| |||| ||| | || ||||||||||| ||||| Sbjct 17747 TTTCATGTCGACTAGGAAGCACGAAGACAACTGAGCCTGGGGGGTACCAGCATTAAAGAG 17806 Query 107197 GGTTGGTGTTGCGTGAATGAA 107217 || |||| ||||||| |||| Sbjct 17807 CGTAGGTGATGCGTGAGTGAA 17827 >seq431 Length=155802 Score = 100 bits (110), Expect = 3e-16 Identities = 339/522 (65%), Gaps = 11/522 (2%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || ||||| || || ||||| || || ||||||||| || || Sbjct 44187 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCA 44128 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| ||||| || ||| | || | | ||| | || ||||| ||||| Sbjct 44127 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATG 44068 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACT--TTGT-GTCA 117450 ||||| ||| ||||| |||| ||||||| ||| || | ||||| |||| | Sbjct 44067 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG---TAGACTCCTTGTCGGTG 44011 Query 117451 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 117510 | ||| |||| ||||| | ||||| || || || | ||| | ||||| | Sbjct 44010 ATCCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTG 43951 Query 117511 AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTT 117570 |||| | | | || ||||| ||||| ||||||| | ||||| ||| Sbjct 43950 AATAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGTT 43891 Query 117571 TCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTAT 117629 || ||| | ||| ||| ||| | || | ||||||| | || || ||| || Sbjct 43890 TCAGAATGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAGCACCGGGCCTCGGGAAT 43832 Query 117630 CTGCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 117689 |||||| || | | || | | || || || || || ||||| || |||| Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772 Query 117690 AAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCA 117746 |||||| || || |||| ||||| | || || | | |||| || | ||||| Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712 Query 117747 GTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCA 43670 >seq1 Length=236255 Score = 89.7 bits (98), Expect = 6e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 155098 GGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 155157 || || ||||| |||||| |||| || ||||| ||||| || | | ||||||||| Sbjct 196554 GGAGCTGGTGTCATTGATGCCGATTACCGTGGTGAGGTCAAGGTTCTCTTGTTCAATCAC 196495 Query 155158 GGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||| ||||| ||||| || | || || |||||||| || || || | || || Sbjct 196494 CACGACGCCGACTTCGAGGTCAAAGAGGGCGACCGCATCGCTCAGCTAGTGTTGGAACGT 196435 Query 155218 TGTGAAACACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACAGAGAGAGGTGCGGGT 155277 || ||| |||||||| | || ||| |||||||||||||| | | || || ||| Sbjct 196434 ATTGTAACTCCCGATGTTGTCGAGGTTGCTGTTCTTGAAGAGAGTGTCCGTGGAGCTGGT 196375 Query 155278 GGATTTGGATCTACTGGCGCCT 155299 || ||||| ||||||| || Sbjct 196374 GGTTTTGGTAGCACTGGCGGCT 196353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589970438462200