Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1152 138 1e-27
>seq1152
Length=79426
Score = 138 bits (152), Expect = 1e-27
Identities = 336/503 (67%), Gaps = 11/503 (2%)
Strand=Plus/Plus
Query 159298 TCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCA 159357
|| ||||| |||||| | || | || || |||| ||| || || || |||||
Sbjct 25233 TCGTTACAGCCTAACTCTGGTGCCCAAGGCGAGTTTGCTGGTCTTCGTGCTATCCATCGC 25292
Query 159358 TACCATCAAGGATCA-GGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACA 159416
||||| | |||| | |||| | ||| | | | |||||||| || | || || ||
Sbjct 25293 TACCA-CGAGGAAAATGGAGGCAAGAAACGTGACATCTGTTTGATTCCTGTTTCTGCTCA 25351
Query 159417 TGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGA 159476
|||||| || ||||| || || | |||||||| ||| ||||| | ||||||||||
Sbjct 25352 TGGAACCAACCCTGCCTCGGCTGCCATGGCAGGTATGCGTGTTGTTCCTATCAAGTGTGA 25411
Query 159477 TGA---TGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAG---CAATCATGAATAC 159530
| | ||| || | || ||| |||||||| | ||| ||| | | || |
Sbjct 25412 TACCACTACTGGAAATTTGGATATCGCTGATCTAGA-AGCCAAGTGCCAA--AAGTATGC 25468
Query 159531 ATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAA 159590
|||||| || |||||||| || || || ||| |||| | |||||| | |
Sbjct 25469 TAATGAACTTGGCTGCATTATGATCACTTACCCTAGTACTTTTGGTATCTTTGAACCTGA 25528
Query 159591 CATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGC 159650
| || || || ||| | |||| |||| | ||||| ||||| || | || || ||
Sbjct 25529 CGTCCGAAAGGCCTGTGATCTTGTGCATGCTTACGGTGGCCAGGTGTACATGGACGGCGC 25588
Query 159651 AAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCA 159710
|| | ||||| ||| | ||||| | || |||| ||| || ||||| || ||
Sbjct 25589 CAACATGAATGCCCAGATTGGTCTTACCTCTCCTGGTGAGATTGGCGCTGATGTGTGCCA 25648
Query 159711 TCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCC 159770
||||| |||| ||||||||||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 25649 CTTAAACCTACACAAGACATTCTGCATTCCTCATGGCGGTGGTGGCCCTGGTGTTGGCCC 25708
Query 159771 TATTGGTGTAGCAAAACATCTCA 159793
||| |||| ||||||||||
Sbjct 25709 TATCTGTGTCAAGAAACATCTCA 25731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588040872350800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |