Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1152 138 1e-27 >seq1152 Length=79426 Score = 138 bits (152), Expect = 1e-27 Identities = 336/503 (67%), Gaps = 11/503 (2%) Strand=Plus/Plus Query 159298 TCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCA 159357 || ||||| |||||| | || | || || |||| ||| || || || ||||| Sbjct 25233 TCGTTACAGCCTAACTCTGGTGCCCAAGGCGAGTTTGCTGGTCTTCGTGCTATCCATCGC 25292 Query 159358 TACCATCAAGGATCA-GGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACA 159416 ||||| | |||| | |||| | ||| | | | |||||||| || | || || || Sbjct 25293 TACCA-CGAGGAAAATGGAGGCAAGAAACGTGACATCTGTTTGATTCCTGTTTCTGCTCA 25351 Query 159417 TGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGA 159476 |||||| || ||||| || || | |||||||| ||| ||||| | |||||||||| Sbjct 25352 TGGAACCAACCCTGCCTCGGCTGCCATGGCAGGTATGCGTGTTGTTCCTATCAAGTGTGA 25411 Query 159477 TGA---TGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAG---CAATCATGAATAC 159530 | | ||| || | || ||| |||||||| | ||| ||| | | || | Sbjct 25412 TACCACTACTGGAAATTTGGATATCGCTGATCTAGA-AGCCAAGTGCCAA--AAGTATGC 25468 Query 159531 ATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAA 159590 |||||| || |||||||| || || || ||| |||| | |||||| | | Sbjct 25469 TAATGAACTTGGCTGCATTATGATCACTTACCCTAGTACTTTTGGTATCTTTGAACCTGA 25528 Query 159591 CATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGC 159650 | || || || ||| | |||| |||| | ||||| ||||| || | || || || Sbjct 25529 CGTCCGAAAGGCCTGTGATCTTGTGCATGCTTACGGTGGCCAGGTGTACATGGACGGCGC 25588 Query 159651 AAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCA 159710 || | ||||| ||| | ||||| | || |||| ||| || ||||| || || Sbjct 25589 CAACATGAATGCCCAGATTGGTCTTACCTCTCCTGGTGAGATTGGCGCTGATGTGTGCCA 25648 Query 159711 TCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCC 159770 ||||| |||| ||||||||||| ||||| ||||| ||||| || ||||| || || || Sbjct 25649 CTTAAACCTACACAAGACATTCTGCATTCCTCATGGCGGTGGTGGCCCTGGTGTTGGCCC 25708 Query 159771 TATTGGTGTAGCAAAACATCTCA 159793 ||| |||| |||||||||| Sbjct 25709 TATCTGTGTCAAGAAACATCTCA 25731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588040872350800