Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq431 196 9e-45
seq539 178 2e-39
>seq431
Length=155802
Score = 196 bits (216), Expect = 9e-45
Identities = 557/849 (66%), Gaps = 24/849 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | |||||||||||||| ||||| || | | ||||||||||||
Sbjct 44479 CTGGTAATCACCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 44420
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTA---TACACCCGTGTCAGGCCCATCTGTTCCAG 47955
||||||| ||||||||| |||| | |||||| | ||| | | ||
Sbjct 44419 CATGAAGTCGAAGGGGTT---TGTGGCACGGTACACCTTTTCGTTGCCTAGAGCAACAAG 44363
Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
|||| | ||||| || |||| ||||| | ||| || | |||||| |||| ||
Sbjct 44362 CAGGCGGTCCGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCAG 44303
Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075
||| | ||||| || || ||||||||||| ||| ||||| || | ||
Sbjct 44302 ACCGCAGGGAAGAGCCTCGGTCAGGAACTCCTTCTCGATCACAACGGCATCAGTGATGAT 44243
Query 48076 CTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132
|| | || || || ||| || | ||||| |||||| | | |||| |||
Sbjct 44242 CTTTTGCACTAGGTCCTTGCTGGGGCGGTTGTTT---AGGTGCGAGA---ACAGCAGGCA 44189
Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192
|||||||| |||||| ||| ||||| || |||||| |||| |||||| |||||
Sbjct 44188 AGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACC 44129
Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252
|||||||| || | || |||||||| || | ||||| | || ||||| |||||
Sbjct 44128 AGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGAT 44069
Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312
|||||| || || || || || || | || | || | || | |||||| | |||
Sbjct 44068 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTAGACTCCTTGTCGGTGAT 44009
Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372
||| || |||||||| ||||| |||||| || || || || ||||| |||
Sbjct 44008 CCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTGAA 43949
Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACAT 48429
|| | ||| || | ||| | ||||| | | |||||| | || |
Sbjct 43948 TAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGC---GAATAGGT 43892
Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489
||||| || | || || || ||||||||| ||||||||| || |||||| |
Sbjct 43891 TTCAGAATGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCGGGAAT 43832
Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549
|||||| || ||||| | ||| | || || || ||||| || ||||| || |||||
Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772
Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCCA 48606
||||||||| || | || | ||| | |||||| | | | ||| |||||
Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712
Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666
| | || | || ||| || || | ||||| ||||||||||||| || || ||
Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCAGAAGGAAGCCTCGGCCTT 43652
Query 48667 TTTGTACAT 48675
||||||||
Sbjct 43651 CTTGTACAT 43643
>seq539
Length=40911
Score = 178 bits (196), Expect = 2e-39
Identities = 817/1278 (64%), Gaps = 51/1278 (4%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | || || | | |||||| | ||| || ||||||
Sbjct 16500 GGGTTGACCACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAGATGTTGGATGTGTAG 16559
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
|| |||| || ||| ||||| ||||||||||| | ||||||||||| |||||||| ||
Sbjct 16560 GGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGATGTGCTGGCTGTAGGCATGGGTGCA 16619
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCC 213086
||||| ||| || | || || |||| || | || | |||||||
Sbjct 16620 ACCAGAAGAGAATTGCGTACACCATGCTGTTTAATCTTCTCCTTCAGAGAAGTCCAGTCC 16679
Query 213087 CATCTGCCAGACAGGTC-CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145
| ||||||| || | |||| | |||||| |||||||||||||| ||||
Sbjct 16680 C---------ACAGGTCACTAG-GAGTCACATCCCACATATCAAACTGCAAGATACCTTG 16729
Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205
| || ||| |||| || | ||||| | || | | || ||| | || ||
Sbjct 16730 GGAGACAGGGGAACCCTCATAGGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGA 16789
Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265
|| || || |||| ||||||||||||||| |||| |||| |||| || ||
Sbjct 16790 AGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGTTTGTTAAGCTGGCGTGCTTC 16849
Query 213266 TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325
||||| ||| ||||| | |||| ||||||||| ||||| || || |
Sbjct 16850 GGGGGATTCGAAAGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAGCCCTGTACACCAAC 16909
Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| ||||| | ||| | || ||| ||| |||| |||| | ||||| ||
Sbjct 16910 ACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGC-TTCCTGGACAGGGTAGTGATTCA 16968
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
|| ||||| ||| |||||||| | |||| ||||| | | ||| |
Sbjct 16969 CATCAATGATGCGGTTTAGGTTGCGAACAACAACTTGAGTGACTT----CGTGTA--GCT 17022
Query 213445 GATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGC----GATGCTG 213494
|| || | || | || || | ||| || ||| ||||| ||||||
Sbjct 17023 TTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCCAGAGATGCT- 17081
Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554
|||||||| || || ||||| | || | | ||||| || ||||| |||||||||
Sbjct 17082 ---AGGTTGCACACAGCAACCTCGTCAGGGGCACAATACTCGATAATCTCAGTGCACAGG 17138
Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTG 213614
|| || |||||||| || || || | || || ||| |||| | || |||
Sbjct 17139 TTTGAGCTGCGGATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAATGGTCTTTG 17198
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGT 213672
|| |||||| | ||| || ||||| ||||| | |||| | |||| ||| || |
Sbjct 17199 TAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGGGCCTCCAGAA--TGGCATACCACAGCT 17256
Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732
| |||||||| || ||| ||| || | | | |||||||| ||| || ||
Sbjct 17257 TCTGGGCCTTGA-CAACCGTGCGACCGCGACCCTCCT--TCTCGTACTTTTCATACAGAG 17313
Query 213733 CGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGG 213791
| | || || | ||| || | | | ||| || || || ||| ||||||||
Sbjct 17314 CCTCAAACTCTTCGCCATAGCAATCCG-CCAAGCCGGGGCATTCATTGGGGCACATGAGA 17372
Query 213792 CTCCAGTCC-CCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGT 213850
|||||||| | | |||| || | || |||||||| ||| || |||||| ||
Sbjct 17373 GTCCAGTCCTCATTTTTCTC-AACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAA 17431
Query 213851 GAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTC 213910
||| ||||| | | | || ||| ||| ||| ||||||| || || || ||
Sbjct 17432 GAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGCAAGTCGAGGAACTC 17491
Query 213911 AAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CC 213967
|||| || || ||||| ||||| | ||| ||||||||||| || || | |||| ||
Sbjct 17492 GAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAAAGGCTCCAGGTCGCTTGTTTCC 17551
Query 213968 GCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTT 214027
|||||||| || | ||| ||||||| | || || | ||| || | |||||
Sbjct 17552 ACCCTGGTCAACATAACGGGCAGTGTTGTTGAAAACACGTAGCATGGGAACGATACCGTT 17611
Query 214028 GGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGGAG 214085
|| ||||| || || || || || ||||| | ||| | | | || ||| |||
Sbjct 17612 CGAAGTACCGTTAGTACCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGGACATTGAG 17671
Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145
| || || || || || |||||| |||||||| || | | | || || |||
Sbjct 17672 A--CCGATACCGCCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATG 17729
Query 214146 CCGGCCATGCTGTCATCT 214163
|| | ||||||||||||
Sbjct 17730 CCCTCGATGCTGTCATCT 17747
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931516439955200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |