Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq576 96.9 2e-14
>seq576
Length=37320
Score = 96.9 bits (106), Expect = 2e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || | |||||| ||| ||| || | || || |||| || ||
Sbjct 12702 ACGCAGACGCAGAACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGAGAGGGT 12643
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | || ||||| |||||||||||||| || ||||| || ||||| ||||| || ||
Sbjct 12642 GCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGGGATACC 12583
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| || || ||||| |||||| ||||||||||| | | | | || |
Sbjct 12582 CTCCTTATCCTGGATCTTGGACTTGACATTGTCAATAGTATCCGAAGACTCGA-CCTCGA 12524
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| |||||||| || || || || ||||| || || |||||
Sbjct 12523 GTGTAATAGTCTTGCCCGTCAGGGTCTTGACAAAGATTTG 12484
Score = 96.9 bits (106), Expect = 2e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || | |||||| || ||| || | || || |||| || ||
Sbjct 12930 ACGCAGACGCAGAACCAAATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGT 12871
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||| || ||||||||||||||||| || ||||| || || |||||||| || ||
Sbjct 12870 GCGACCATCCTCGAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACC 12811
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|||||||| || ||||| |||||| ||||||||||| | | | | || |
Sbjct 12810 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTATCCGAAGACTCGA-CCTCGA 12752
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| |||||||| || || || || ||||| || || |||||
Sbjct 12751 GTGTAATAGTCTTGCCCGTCAGGGTCTTGACAAAGATTTG 12712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268118932732940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |