Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq1152 114 1e-20
>seq1152
Length=79426
Score = 114 bits (126), Expect = 1e-20
Identities = 331/503 (66%), Gaps = 11/503 (2%)
Strand=Plus/Minus
Query 138169 TGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATAC 138228
|||||||||| |||| ||||| || || ||||| || ||||| ||||| ||||| |
Sbjct 25731 TGAGATGTTTCTTGACACAGATAGGGCCAACACCAGGGCCACCACCGCCATGAGGAATGC 25672
Query 138229 AGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTA 138288
|||||||||| |||| |||| || || ||||| || ||| |||| || | |
Sbjct 25671 AGAATGTCTTGTGTAGGTTTAAGTGGCACACATCAGCGCCAATCTCACCAGGAGAGGTAA 25612
Query 138289 GACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAA 138348
|||| | ||| ||||| | || || || || | || ||||| ||||| | |||| |
Sbjct 25611 GACCAATCTGGGCATTCATGTTGGCGCCGTCCATGTACACCTGGCCACCGTAAGCATGCA 25552
Query 138349 CGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408
| | | ||| || || || || | |||||| | |||| ||| || || || |
Sbjct 25551 CAAGATCACAGGCCTTTCGGACGTCAGGTTCAAAGATACCAAAAGTACTAGGGTAAGTGA 25492
Query 138409 TCATAATACATGAGAGTTCAAATGTATTCATGATTG---CTTTCTTCTCTAGATCTTTGA 138465
||||||| || |||||| | || | | ||| ||| | |||||||| ||
Sbjct 25491 TCATAATGCAGCCAAGTTCATTAGCATACTT--TTGGCACTTGGCT-TCTAGATCAGCGA 25435
Query 138466 TGTCTATGTTGCCATCA---TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGA 138522
| || | || ||| | ||||||||||| | ||||| ||| |||||||||
Sbjct 25434 TATCCAAATTTCCAGTAGTGGTATCACACTTGATAGGAACAACACGCATACCTGCCATGG 25375
Query 138523 CTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTAT 138582
| || ||||| || |||||||| || || | || |||| ||| | | | ||| |
Sbjct 25374 CAGCCGAGGCAGGGTTGGTTCCATGAGCAGAAACAGGAATCAAACAGATGTCACGTTTCT 25315
Query 138583 CATCTCC-TGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGT 138641
|||| | |||| | || || ||||| || || || ||| |||| || ||
Sbjct 25314 TGCCTCCATTTTCCTCG-TGGTAGCGATGGATAGCACGAAGACCAGCAAACTCGCCTTGG 25256
Query 138642 GATCCTGCGTTAGGTTGTAATGA 138664
| || | |||||| ||||| ||
Sbjct 25255 GCACCAGAGTTAGGCTGTAACGA 25233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578988231340600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |