Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq539 156 5e-33
seq431 100 3e-16
seq1 86.0 7e-12
seq564 84.2 3e-11
>seq539
Length=40911
Score = 156 bits (172), Expect = 5e-33
Identities = 1037/1649 (63%), Gaps = 39/1649 (2%)
Strand=Plus/Minus
Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364
|||| ||||||| |||| || ||||| ||||||||||| || | ||| ||||
Sbjct 17827 TTCACTCACGCATCACCTACGCTCTTTAATGCTGGTACCCCCCAGGCTCAGTTGTCTTCG 17768
Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424
|||||||| ||| || || || ||| ||| | || || || | || || | |
Sbjct 17767 TGCTTCCTAGTCGACATGAAAGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 17708
Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 75484
||||| || || ||| |||||| ||||| || | | |||| | | | |||
Sbjct 17707 TGTGCCATGATTTCCAAGATGGCTGGCGGTATCGGTCTCAATGTCCACCGTATTCGTGCC 17648
Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544
| | ||| ||| || || || ||| || | ||||| |||| ||||| ||
Sbjct 17647 ACTGGCTCTTACATTGCTGGTACTAACGGTACTTCGAACGGTATCGTTCCCATGCTACGT 17588
Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCC 75598
|| || ||| ||| || || ||||| | || ||| | |||| || ||
Sbjct 17587 GTTTTCAACAACACTGCCCGTTATGTTGACCA---GGGTGGAAACAAGCGACCTGGAGCC 17531
Query 75599 ATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTC 75658
| || | ||| | || ||||||||||| ||| || | |||||||| || || ||
Sbjct 17530 TTTGCCATTTACCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTGCGCAAG 17471
Query 75659 AACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGA 75717
||||| || | ||||| | || ||| | | || || || | |||||||||| ||
Sbjct 17470 AACCACGGAAAGGAAGAAG-TCCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 17412
Query 75718 CCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGG 75776
| | ||||||||||| |||||| | || | ||| |||| | || || | || |
Sbjct 17411 CTTGTTCATGAAGCGTGTTGAGAAAAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 17352
Query 75777 CACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835
| || | | | | || || ||| || |||||||| || || || |||||| ||
Sbjct 17351 CCCCGGCT-TGGCGGATTGCTATGGC-GAAGAGTTTGAGGCTCTGTATGAAAAGTACGAG 17294
Query 75836 GAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAA 75894
|||||||| | | || ||| | || | | || | | ||| | || ||||| |
Sbjct 17293 AAGGAGGGTCGCGGTCGCACGGTTGT-CAAGGCCCAGAAGCTGTGGTATGCCATTCTGGA 17235
Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954
| ||||| |||||||| | || | ||||||||||| || ||| ||| |||||
Sbjct 17234 GGCCCAGACTGAGACTGGCAACCCTTTCATGCTTTACAAAGACCATTGCAACCGCAAGAG 17175
Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014
|| || || ||| | || || ||| |||||||| || ||||| || ||| | |||||
Sbjct 17174 CAATCAGAAAAATCTAGGTACCATCCGCAGCTCAAACCTGTGCACTGAGATTATCGAGTA 17115
Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074
| || ||| ||||| ||||| | ||||| | |||||||| | ||
Sbjct 17114 TTGTGCCCCTGACGAGGTTGCTGTGTGCAACCTAGCATCTCTGGCCCTTCCTTCCTTCGT 17055
Query 76075 CAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTAC 76134
| | | | | | ||| | | |||| || || ||| |||| | |||||
Sbjct 17054 GGACTACAACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACTCAAGTTGTTGT 16995
Query 76135 CAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTC 76194
|| |||||||| ||||||| ||| || || || || || | ||
Sbjct 16994 TCGCAACCTAAACCGCATCATTGATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAG 16935
Query 76195 TAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTT 76254
|| ||||| ||| | || |||||| | ||||| || || | || |||| || ||
Sbjct 16934 CAACATGCGCCACCGTCCCATTGGTGTTGGTGTACAGGGCTTGGCTGATGCTTTCCTTGC 16875
Query 76255 GTGCCGCTACGCATTT-GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAA 76313
|||| | || ||| || || ||||| || | || | || |||||||
Sbjct 16874 TCTCCGC-ATGCCTTTCGAATCCCCCGAAGCACGCCAGCTTAACAAACAGATTTTTGAAA 16816
Query 76314 CCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATG 76373
|||| || ||||| | || || ||| | || | | | ||| | ||
Sbjct 16815 CCATCTACCACGCCGCACTAACTGCTTCAATGGAAATCGCCCAGACGGAGGGTACTTACT 16756
Query 76374 AGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTG 76433
|| | ||||||||| || | |||||||| | | |||||||||||||||| | |||
Sbjct 16755 CAACCTATGAGGGTTCCCCTGTCTCCCAAGGTATCTTGCAGTTTGATATGTGGG-ATGTG 16697
Query 76434 AAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCT 76491
| || || | | | | |||||| | ||| ||||| || || || | ||| |
Sbjct 16696 ACTCCTAG-TGACCTGTGGGACTGGACTTCTCTGAAGGAGAAGATTAAACAGCATGGTGT 16638
Query 76492 TCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 76551
|| || |||| || | ||||| ||||| |||||| ||| | || || |||| ||
Sbjct 16637 ACGCAATTCTCTTCTGGTTGCACCCATGCCTACAGCCAGCACATCGCAGATTCTGGGCAA 16578
Query 76552 TAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGA 76611
||||| ||||| ||||| |||||| | |||||||||| | | | || || || ||
Sbjct 16577 CAATGAGTGCTTCGAACCCTACACATCCAACATCTACCAGCGCCGCGTTCTTGCTGGCGA 16518
Query 76612 GTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAA 76671
||| | |||||| ||| | |||||| | ||||| | ||||| |
Sbjct 16517 GTTCCAGGTGGTCAACCCCTGGCTCCTACGTGACCTTGTCGATCTTGGTTTATGGTCTGA 16458
Query 76672 GGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATCTCAGATAT 76728
|||||||| | | || | | |||| ||| || ||||| || ||| | ||
Sbjct 16457 CAATATGAAGAACCGCA---TTATTGCGGACAATGGATCTATTCAGAACATCCCTAGCAT 16401
Query 76729 CCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGT 76785
|| | |||||| || ||| ||| || || |||||||| | || | || ||
Sbjct 16400 TCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAAATTTCCCAGCGTACAGTTG- 16342
Query 76786 CATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATT 76845
| | ||||| || || |||||| |||||||| ||| || ||| | | |||
Sbjct 16341 --TGCAAATGGCTGCTGACCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCTAAACATT 16286
Query 76846 --CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAG 76903
|||| || ||| || ||| |||| || | ||||| | || |||||||
Sbjct 16285 CACATGAAAGATCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAACTA 16226
Query 76904 GGGCTCAAAACCGGAATGTACTATCTCCG 76932
|| ||||| || || |||||||| || ||
Sbjct 16225 GGTCTCAAGACGGGCATGTACTACCTGCG 16197
>seq431
Length=155802
Score = 100 bits (110), Expect = 3e-16
Identities = 339/522 (65%), Gaps = 11/522 (2%)
Strand=Plus/Plus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
|||||||| ||||| ||||| | ||||| ||||| |||||||||| | || ||||
Sbjct 43670 TGGACTGCTGAAGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGTCTGAAC 43729
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
| | || || | ||||| |||| || || |||||||||| || ||||| ||
Sbjct 43730 AAGGACGAGCAGTACTTCATCTCCCACATTCTCGCCTTCTTTGCTGCCTCTGATGGCATC 43789
Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890
|| || || || | | || | | || |||||||| ||| || || |
Sbjct 43790 GTCAACGAAAACCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATTCCCGAGGCCCGGTGC 43849
Query 64891 TTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTGAT 64949
||||||| | || | ||| ||| ||| | ||| ||||| ||||| | ||
Sbjct 43850 TTCTACGGTT-TCCAGATCATGATGGAAAACATCCATTCTGAAACCTATTCGCTGCTAAT 43908
Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGT 65009
||||| ||||| ||||| || | | | |||| | ||||| | ||| |
Sbjct 43909 TGACACCTACATCAAGGAGCCCTCGCAGCGCACATACCTATTCAATGCCATTGACACTAT 43968
Query 65010 ACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCTCG 65066
|| || || ||||| | ||||| |||| ||| | | |||| |||||
Sbjct 43969 TCCCTGCATCCGTCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCTA- 44027
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
| || ||| ||||||| |||| ||||| ||| ||||| ||||| ||||| || |
Sbjct 44028 --CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGC 44085
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | | || | ||| || ||||| ||||||||||| || || |||||||||
Sbjct 44086 CTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAA 44145
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
|| || ||||| || || ||||| || ||| || |||||
Sbjct 44146 CGAGCTCATTTCTCGTGACGAGGGCCTGCACACCGACTTTGC 44187
>seq1
Length=236255
Score = 86.0 bits (94), Expect = 7e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 27776 AGGCGCCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTT 27835
|| ||||||| ||||| ||||| || || | | |||||||||||||| ||| |
Sbjct 196353 AGCCGCCAGTGCTACCAAAACCACCAGCTCCACGGACACTCTCTTCAAGAACAGCAACCT 196412
Query 27836 CCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCT 27895
| |||||||| ||| || || || | || || || |||||||| || || | |
Sbjct 196413 CGACAACATCGGGAGTTACAATACGTTCCAACACTAGCTGAGCGATGCGGTCGCCCTCTT 196472
Query 27896 TTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGT 27955
| ||||| ||||| ||| ||||||||| | | || ||||| ||||| || |
Sbjct 196473 TGACCTCGAAGTCGGCGTCGTGGTGATTGAACAAGAGAACCTTGACCTCACCACGGTAAT 196532
Query 27956 CGGGATCAATAACACCCGCACC 27977
||| |||||| ||||| || ||
Sbjct 196533 CGGCATCAATGACACCAGCTCC 196554
>seq564
Length=132701
Score = 84.2 bits (92), Expect = 3e-11
Identities = 186/274 (68%), Gaps = 10/274 (4%)
Strand=Plus/Plus
Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATC 175287
||| ||||| | || |||||| | ||||| | | |||| || ||||||||||||
Sbjct 129837 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAA---AGTTTGTGCGTCTGGGTGCCAAGATC 129893
Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347
|| || ||||| | || |||| || || ||||| ||||| || || || |||
Sbjct 129894 CCGCGTGGCGCTATCCTATCGGGCCCCCCGGGAACGGGCAAGACGCTGCTAGCAAAGGCC 129953
Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA--ACTTTGTGGAGA 175405
| || || || ||| || || ||| || |||| || || || | ||||| ||||
Sbjct 129954 ACGGCTGGCGAGTCAGGCGTTCCCTTCTTC-AGTG-TCAGCGGCTCCGAGTTTGTCGAGA 130011
Query 175406 TGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATC 175465
||||||| || ||||| | | || || ||||| |||| | || ||| | ||
Sbjct 130012 TGTTTGTCGGCGTGGGCCCGTCGCGAGTGCGTGATCTTTTTGCTACGGCGCGCAAGAACG 130071
Query 175466 AACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
||||| || |||| ||||| |||||||||||
Sbjct 130072 CGCCATGCATCATCTTTATTGACGAGATTGATGC 130105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596559122746400
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