Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq539 156 5e-33 seq431 100 3e-16 seq1 86.0 7e-12 seq564 84.2 3e-11 >seq539 Length=40911 Score = 156 bits (172), Expect = 5e-33 Identities = 1037/1649 (63%), Gaps = 39/1649 (2%) Strand=Plus/Minus Query 75305 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGT 75364 |||| ||||||| |||| || ||||| ||||||||||| || | ||| |||| Sbjct 17827 TTCACTCACGCATCACCTACGCTCTTTAATGCTGGTACCCCCCAGGCTCAGTTGTCTTCG 17768 Query 75365 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 75424 |||||||| ||| || || || ||| ||| | || || || | || || | | Sbjct 17767 TGCTTCCTAGTCGACATGAAAGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 17708 Query 75425 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 75484 ||||| || || ||| |||||| ||||| || | | |||| | | | ||| Sbjct 17707 TGTGCCATGATTTCCAAGATGGCTGGCGGTATCGGTCTCAATGTCCACCGTATTCGTGCC 17648 Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544 | | ||| ||| || || || ||| || | ||||| |||| ||||| || Sbjct 17647 ACTGGCTCTTACATTGCTGGTACTAACGGTACTTCGAACGGTATCGTTCCCATGCTACGT 17588 Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCC 75598 || || ||| ||| || || ||||| | || ||| | |||| || || Sbjct 17587 GTTTTCAACAACACTGCCCGTTATGTTGACCA---GGGTGGAAACAAGCGACCTGGAGCC 17531 Query 75599 ATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTC 75658 | || | ||| | || ||||||||||| ||| || | |||||||| || || || Sbjct 17530 TTTGCCATTTACCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTGCGCAAG 17471 Query 75659 AACCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGA 75717 ||||| || | ||||| | || ||| | | || || || | |||||||||| || Sbjct 17470 AACCACGGAAAGGAAGAAG-TCCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 17412 Query 75718 CCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGG 75776 | | ||||||||||| |||||| | || | ||| |||| | || || | || | Sbjct 17411 CTTGTTCATGAAGCGTGTTGAGAAAAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 17352 Query 75777 CACCAGGTCTCTCCGAC-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 | || | | | | || || ||| || |||||||| || || || |||||| || Sbjct 17351 CCCCGGCT-TGGCGGATTGCTATGGC-GAAGAGTTTGAGGCTCTGTATGAAAAGTACGAG 17294 Query 75836 GAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAA 75894 |||||||| | | || ||| | || | | || | | ||| | || ||||| | Sbjct 17293 AAGGAGGGTCGCGGTCGCACGGTTGT-CAAGGCCCAGAAGCTGTGGTATGCCATTCTGGA 17235 Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954 | ||||| |||||||| | || | ||||||||||| || ||| ||| ||||| Sbjct 17234 GGCCCAGACTGAGACTGGCAACCCTTTCATGCTTTACAAAGACCATTGCAACCGCAAGAG 17175 Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014 || || || ||| | || || ||| |||||||| || ||||| || ||| | ||||| Sbjct 17174 CAATCAGAAAAATCTAGGTACCATCCGCAGCTCAAACCTGTGCACTGAGATTATCGAGTA 17115 Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 | || ||| ||||| ||||| | ||||| | |||||||| | || Sbjct 17114 TTGTGCCCCTGACGAGGTTGCTGTGTGCAACCTAGCATCTCTGGCCCTTCCTTCCTTCGT 17055 Query 76075 CAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTAC 76134 | | | | | | ||| | | |||| || || ||| |||| | ||||| Sbjct 17054 GGACTACAACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACTCAAGTTGTTGT 16995 Query 76135 CAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTC 76194 || |||||||| ||||||| ||| || || || || || | || Sbjct 16994 TCGCAACCTAAACCGCATCATTGATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAG 16935 Query 76195 TAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTT 76254 || ||||| ||| | || |||||| | ||||| || || | || |||| || || Sbjct 16934 CAACATGCGCCACCGTCCCATTGGTGTTGGTGTACAGGGCTTGGCTGATGCTTTCCTTGC 16875 Query 76255 GTGCCGCTACGCATTT-GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAA 76313 |||| | || ||| || || ||||| || | || | || ||||||| Sbjct 16874 TCTCCGC-ATGCCTTTCGAATCCCCCGAAGCACGCCAGCTTAACAAACAGATTTTTGAAA 16816 Query 76314 CCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATG 76373 |||| || ||||| | || || ||| | || | | | ||| | || Sbjct 16815 CCATCTACCACGCCGCACTAACTGCTTCAATGGAAATCGCCCAGACGGAGGGTACTTACT 16756 Query 76374 AGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTG 76433 || | ||||||||| || | |||||||| | | |||||||||||||||| | ||| Sbjct 16755 CAACCTATGAGGGTTCCCCTGTCTCCCAAGGTATCTTGCAGTTTGATATGTGGG-ATGTG 16697 Query 76434 AAACCAAGCTCAAC--TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCT 76491 | || || | | | | |||||| | ||| ||||| || || || | ||| | Sbjct 16696 ACTCCTAG-TGACCTGTGGGACTGGACTTCTCTGAAGGAGAAGATTAAACAGCATGGTGT 16638 Query 76492 TCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 76551 || || |||| || | ||||| ||||| |||||| ||| | || || |||| || Sbjct 16637 ACGCAATTCTCTTCTGGTTGCACCCATGCCTACAGCCAGCACATCGCAGATTCTGGGCAA 16578 Query 76552 TAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGA 76611 ||||| ||||| ||||| |||||| | |||||||||| | | | || || || || Sbjct 16577 CAATGAGTGCTTCGAACCCTACACATCCAACATCTACCAGCGCCGCGTTCTTGCTGGCGA 16518 Query 76612 GTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAA 76671 ||| | |||||| ||| | |||||| | ||||| | ||||| | Sbjct 16517 GTTCCAGGTGGTCAACCCCTGGCTCCTACGTGACCTTGTCGATCTTGGTTTATGGTCTGA 16458 Query 76672 GGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATCTCAGATAT 76728 |||||||| | | || | | |||| ||| || ||||| || ||| | || Sbjct 16457 CAATATGAAGAACCGCA---TTATTGCGGACAATGGATCTATTCAGAACATCCCTAGCAT 16401 Query 76729 CCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGT 76785 || | |||||| || ||| ||| || || |||||||| | || | || || Sbjct 16400 TCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAAATTTCCCAGCGTACAGTTG- 16342 Query 76786 CATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATT 76845 | | ||||| || || |||||| |||||||| ||| || ||| | | ||| Sbjct 16341 --TGCAAATGGCTGCTGACCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCTAAACATT 16286 Query 76846 --CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAG 76903 |||| || ||| || ||| |||| || | ||||| | || ||||||| Sbjct 16285 CACATGAAAGATCCCACCATGGGCAAGATCACCAGCATGCACTTTGCCGGCTGGAAACTA 16226 Query 76904 GGGCTCAAAACCGGAATGTACTATCTCCG 76932 || ||||| || || |||||||| || || Sbjct 16225 GGTCTCAAGACGGGCATGTACTACCTGCG 16197 >seq431 Length=155802 Score = 100 bits (110), Expect = 3e-16 Identities = 339/522 (65%), Gaps = 11/522 (2%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 |||||||| ||||| ||||| | ||||| ||||| |||||||||| | || |||| Sbjct 43670 TGGACTGCTGAAGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGTCTGAAC 43729 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 | | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 43730 AAGGACGAGCAGTACTTCATCTCCCACATTCTCGCCTTCTTTGCTGCCTCTGATGGCATC 43789 Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890 || || || || | | || | | || |||||||| ||| || || | Sbjct 43790 GTCAACGAAAACCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATTCCCGAGGCCCGGTGC 43849 Query 64891 TTCTACGCATATCAATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAATTGAT 64949 ||||||| | || | ||| ||| ||| | ||| ||||| ||||| | || Sbjct 43850 TTCTACGGTT-TCCAGATCATGATGGAAAACATCCATTCTGAAACCTATTCGCTGCTAAT 43908 Query 64950 TGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGT 65009 ||||| ||||| ||||| || | | | |||| | ||||| | ||| | Sbjct 43909 TGACACCTACATCAAGGAGCCCTCGCAGCGCACATACCTATTCAATGCCATTGACACTAT 43968 Query 65010 ACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAA--AGTCTCG 65066 || || || ||||| | ||||| |||| ||| | | |||| ||||| Sbjct 43969 TCCCTGCATCCGTCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCTA- 44027 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | || ||| ||||||| |||| ||||| ||| ||||| ||||| ||||| || | Sbjct 44028 --CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCGGGTGC 44085 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 ||| | | || | ||| || ||||| ||||||||||| || || ||||||||| Sbjct 44086 CTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAA 44145 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || ||||| || || ||||| || ||| || ||||| Sbjct 44146 CGAGCTCATTTCTCGTGACGAGGGCCTGCACACCGACTTTGC 44187 >seq1 Length=236255 Score = 86.0 bits (94), Expect = 7e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 27776 AGGCGCCAGTAGATCCAAATCCACCCGCACCTCTCTCTGTCTCTTCAAGAACACCAATTT 27835 || ||||||| ||||| ||||| || || | | |||||||||||||| ||| | Sbjct 196353 AGCCGCCAGTGCTACCAAAACCACCAGCTCCACGGACACTCTCTTCAAGAACAGCAACCT 196412 Query 27836 CCTGCACATCGGGTGTTTCACAGCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCT 27895 | |||||||| ||| || || || | || || || |||||||| || || | | Sbjct 196413 CGACAACATCGGGAGTTACAATACGTTCCAACACTAGCTGAGCGATGCGGTCGCCCTCTT 196472 Query 27896 TTACCTCAAAGTCTTTGTCTCCGTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGT 27955 | ||||| ||||| ||| ||||||||| | | || ||||| ||||| || | Sbjct 196473 TGACCTCGAAGTCGGCGTCGTGGTGATTGAACAAGAGAACCTTGACCTCACCACGGTAAT 196532 Query 27956 CGGGATCAATAACACCCGCACC 27977 ||| |||||| ||||| || || Sbjct 196533 CGGCATCAATGACACCAGCTCC 196554 >seq564 Length=132701 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/274 (68%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGT---GGTGCCAAGATC 175287 ||| ||||| | || |||||| | ||||| | | |||| || |||||||||||| Sbjct 129837 GAGTTTGTGCAGTTCCTCAAGAAGCCCGAAA---AGTTTGTGCGTCTGGGTGCCAAGATC 129893 Query 175288 CCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCC 175347 || || ||||| | || |||| || || ||||| ||||| || || || ||| Sbjct 129894 CCGCGTGGCGCTATCCTATCGGGCCCCCCGGGAACGGGCAAGACGCTGCTAGCAAAGGCC 129953 Query 175348 ATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAA--ACTTTGTGGAGA 175405 | || || || ||| || || ||| || |||| || || || | ||||| |||| Sbjct 129954 ACGGCTGGCGAGTCAGGCGTTCCCTTCTTC-AGTG-TCAGCGGCTCCGAGTTTGTCGAGA 130011 Query 175406 TGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATC 175465 ||||||| || ||||| | | || || ||||| |||| | || ||| | || Sbjct 130012 TGTTTGTCGGCGTGGGCCCGTCGCGAGTGCGTGATCTTTTTGCTACGGCGCGCAAGAACG 130071 Query 175466 AACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 ||||| || |||| ||||| ||||||||||| Sbjct 130072 CGCCATGCATCATCTTTATTGACGAGATTGATGC 130105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596559122746400