Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq576 84.2 4e-11
>seq576
Length=37320
Score = 84.2 bits (92), Expect = 4e-11
Identities = 154/226 (68%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | || || || |||| || | |||| || || || ||
Sbjct 12488 ATTTGCATACCACCACGCAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTG 12429
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|||||||| | || | || || | || |||||||||||||| | | ||| |||
Sbjct 12428 TAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGA 12369
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || ||||| || || |||| || | ||| || ||||| ||
Sbjct 12368 TCCGGAGGGATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAG 12309
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAA 193350
||||| ||||| || || || || || || || || || || ||||
Sbjct 12308 GACTCGACTTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACAA 12263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899638599819600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |