Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq686 113 1e-19
seq669 93.3 1e-13
>seq686
Length=112311
Score = 113 bits (124), Expect = 1e-19
Identities = 208/300 (69%), Gaps = 10/300 (3%)
Strand=Plus/Minus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||| | || |||||| || || || |||||| | || || |||||
Sbjct 101147 TCTTCCAAAGCCTTAACTAGACGACGTTGGATGTAGCCAGTTTCTGCAGTCTTCACAGCA 101088
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTA-- 302689
|| ||||| ||||| ||||||| ||||||||||||| || | || | | |||
Sbjct 101087 GTGTCAATAAGACCTTCACGACCGGCCATAGCATGGAAAAAGAATTC-GCTAGGAGTAAG 101029
Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749
||| | ||| | ||| ||||||| || ||||| || ||||| |||| ||| |||||
Sbjct 101028 GCCACGCAA-GTATGAGTTCTCAACAAACCCACGAGCTTCGGGGGAATAATCGTCCTTGG 100970
Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809
| || || || || |||| | | | | || | || ||||||||||| ||||| | |
Sbjct 100969 TGAAATGAGGGAGAGTCCGATATTTAAACCCAAAAGGAATACGCTTTCCTTCAACAATTT 100910
Query 302810 GCTGTC---CCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866
|||| | |||| || ||||||||||||| || | | |||||||| ||||
Sbjct 100909 GCTGACCGACCAGAGCCG---TCATCTGCGAAATGTTGATAGTCGAACCCTTGGAACCAG 100853
>seq669
Length=28067
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| |||||||| | | ||| | || || | | | ||||| || | ||| | | |||
Sbjct 15217 ATCAGACCACAAATCTCACAAATGTGCACTCGGAAGGCATCCGAAACCTCAAACAACCGC 15276
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| | |||||| || | |||||||||||||||||||||||| ||||||
Sbjct 15277 TCCTTCAAGAACGCTGCTGCACCATGAGCAATCATACAATCACGCTCCATTTCTCCGAAA 15336
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|| | ||||||||| ||||| | ||| || | ||||| || ||
Sbjct 15337 CGCAAACCACCATCACGAGCACGACCTTCAACTGGCTGTCGCGT 15380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471791104983485
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |