Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq576 86.0 5e-12
>seq576
Length=37320
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 107566 TTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCG 107625
||||||| || | || ||||| ||||| ||| ||||| ||| | ||||| |||
Sbjct 12263 TTGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACCATCG 12322
Query 107626 GCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTA 107685
| | || || ||||| ||||| || || | || |||||||||| | || |
Sbjct 12323 ACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTCA 12382
Query 107686 TTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGG 107745
||| ||| || || ||||| ||||||| | || || | ||||||||||| || ||||
Sbjct 12383 TTTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGG 12442
Query 107746 AGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
| ||||| | ||| |||| || | |||| || ||
Sbjct 12443 AATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 12479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398869969858045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |