Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01- 02] 1,405 sequences; 26,875,327 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq576 86.0 5e-12 >seq576 Length=37320 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 107566 TTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTCG 107625 ||||||| || | || ||||| ||||| ||| ||||| ||| | ||||| ||| Sbjct 12263 TTGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCTGATACCATCG 12322 Query 107626 GCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTA 107685 | | || || ||||| ||||| || || | || |||||||||| | || | Sbjct 12323 ACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTCA 12382 Query 107686 TTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGG 107745 ||| ||| || || ||||| ||||||| | || || | ||||||||||| || |||| Sbjct 12383 TTTTTGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGG 12442 Query 107746 AGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 | ||||| | ||| |||| || | |||| || || Sbjct 12443 AATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 12479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398869969858045