Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq539 176 4e-39
seq431 163 3e-35
seq576 113 4e-20
seq492 102 8e-17
seq1207 100 3e-16
>seq539
Length=40911
Score = 176 bits (194), Expect = 4e-39
Identities = 941/1487 (63%), Gaps = 51/1487 (3%)
Strand=Plus/Plus
Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGT---CGCTTTATCTTCATC 148118
||||||||||| || ||||||||||| ||||||| | | | |||| ||
Sbjct 16305 TGGTCAATGAAAGCACCACGGTCAGCAGCCATTTGCACAACTGTACGCTGGGAA---ATT 16361
Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178
||||| | ||||||||||| || |||| | | ||||||| |||| ||| |
Sbjct 16362 TCCCAAACGGTCTTGTACAGAGCTTTAATATCAGCAGGAATGCTAGGGATGTTCTGAATA 16421
Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238
|| || || ||||| ||| | || ||| | ||| | ||| || ||||
Sbjct 16422 GATCCATTGTCCGCAATAATGCGGTTCTTCATATTGTCAGACCATAAACCAAGATCGACA 16481
Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298
|||||| | || | | || |||||||| |||||||| || || ||||| ||| |
Sbjct 16482 AGGTCACGTAGGAGCCAGGGGTTGACCACCTGGAACTCGCCAGCAAGAACGCGGCGCTGG 16541
Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358
|| | |||| || | ||||| || |||| |||||||||| |||||||| || |
Sbjct 16542 TAGATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGATGTGCTG 16601
Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418
|| || |||||| || ||||| || || ||||| | ||| | | ||| || || |
Sbjct 16602 GCTGTAGGCATGGGTGCAACCAGAAGAGAATTGCGTACACCATGCTGTTTAATCTTCTCC 16661
Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCCACATGTCGTACTGCA 148476
||||||| | ||||||||| | || || || ||||| | |||||| || ||||||
Sbjct 16662 TTCAGAGAAGTCCAGTCCCACA--GGTCACTAGGAGTCACATCCCACATATCAAACTGCA 16719
Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536
|| || || | ||| ||||| || | ||| | || | || | || |
Sbjct 16720 AGATACCTTGGGAGACAGGGGAACCCTCATAGGTTGAGTAAGTACCCTCCGTCTGGGCGA 16779
Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596
||| || || ||| ||| ||| || || || ||| || |||| |||
Sbjct 16780 TTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGTTTGTTAAGCT 16839
Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656
| || | |||| | ||||| || || | || || || || | |||||
Sbjct 16840 GGCGTGCTTCGGGGGATTCGAAAGGCATGCGGAGAGCAAGGAAAGCATCAGCCAAGCCCT 16899
Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGAT 148716
|||| || || |||||||| ||||| |||||| | | | || || || || |
Sbjct 16900 GTACACCAACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGT 16959
Query 148717 AGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCA 148776
|||| || || ||||| || || ||||| || || || | || | | | | |
Sbjct 16960 AGTGATTCACATCAATGATGCGGTTTAGGTTGCGAACAACAACTTGAGTGACTTCGTGTA 17019
Query 148777 GCAATTCAAAATCGTAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAG 148827
|| || ||| || ||| |||| || |||| | | | | ||| | ||
Sbjct 17020 GCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGG---AAGGGCCAGAG 17076
Query 148828 AGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACA 148887
| ||||| |||||||| || ||| || ||||| | ||||| | ||||| | |||||
Sbjct 17077 ATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCACAATACTCGATAATCTCAGTGCACA 17136
Query 148888 GATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944
| || ||||| ||| || | || || ||||||||||||| |||||| ||
Sbjct 17137 GGTTTGAGCTGC---GGATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAATGGT 17193
Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATG 149002
| ||||| |||||| | || |||||| || ||| | |||| ||| | | |
Sbjct 17194 CTTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATGGCATACCA-- 17251
Query 149003 CAGGTCCTGCGCGCGCACTTG----CTGCTCG-TAGCGACCCTCCTGCTCGTATAAAGTA 149057
||| | ||| || |||| | | || ||||||||||| |||||| |
Sbjct 17252 CAGCTTCTGGGC-----CTTGACAACCGTGCGACCGCGACCCTCCTTCTCGTACTTTTCA 17306
Query 149058 TACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCAC 149117
||||| ||| ||| | ||||| |||||||| | | |||||||| | | ||||||
Sbjct 17307 TACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCAC 17366
Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177
||||| | ||| | | | | || |||||||| |||| ||| | ||| ||
Sbjct 17367 ATGAGAGTCCAGTCCTCATTTTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGG 17426
Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237
|| | | ||||| || || | ||||| || ||| ||||| || |||
Sbjct 17427 GCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGCAAGTCGAGG 17486
Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG 149297
| ||| | || || ||||| ||||| | ||| | || | || || ||||||
Sbjct 17487 AACTCGAAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAAAGGCTCCAGGTCGCTTG 17546
Query 149298 ---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354
|| |||||||| || | || | ||||||| || || || | ||| || | ||
Sbjct 17547 TTTCCACCCTGGTCAACATAACGGGCAGTGTTGTTGAAAACACGTAGCATGGGAACGATA 17606
Query 149355 CCACTGGCAGTGCCGTTAGTA-GAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCAC 149413
|| | | ||| ||||||||| ||| |||| | ||| || || | ||| ||
Sbjct 17607 CCGTTCGAAGTACCGTTAGTACCAGC-AATGTAAGAGCCAGTGGCACGAATACGGTGGAC 17665
Query 149414 GTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAG 149471
|||| ||||| ||||| ||| | ||| || || || | |||| ||| || |
Sbjct 17666 ATTGAGACCGATACCGCCAGCCAT-CTTGGAAATCATGGCACAAGTC-TTGAGGGTATCG 17723
Query 149472 TAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGA 149518
|| ||||||||||||||||| |||||| | || ||||||||
Sbjct 17724 TAAATGCCCTCGATGCTGTCATCTTTCATGTCGACTAGGAAGCACGA 17770
>seq431
Length=155802
Score = 163 bits (180), Expect = 3e-35
Identities = 347/507 (68%), Gaps = 21/507 (4%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| || |||||||| ||||| || ||||| | | ||| ||||| |
Sbjct 44479 CTGGTAATCACCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 44420
Query 120411 CATAAACTCGAACGGGTTGCTCGC--GTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468
||| || ||||| ||||| | || | || | ||||| | ||| | || |||
Sbjct 44419 CATGAAGTCGAAGGGGTTTGTGGCACGGTACACCTTTTCG--TTGCCTAGAGCAACAAGC 44362
Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528
|| |||||||| |||||||||||||||| ||| | |||||||| || ||||
Sbjct 44361 AGGCGGTCCGCAACAAACTCAATGTACTGCTTCATCAGATCGGCGTTCATTCCTAGCAGA 44302
Query 120529 GCCACCGGCAAC-GCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT 120587
|| | || || ||| || | ||||||||||| || | || || || ||| ||
Sbjct 44301 -CCGCAGGGAAGAGCCTCGGTCAGGAACTCCTTCTCGATCACAACGGCATCAGTGATGAT 44243
Query 120588 GGCGAGCA-TAGTG--TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644
||| ||| | || ||| |||| || | |||| | | | ||||||
Sbjct 44242 CTTTTGCACTAGGTCCTTGCTGGGGCGGTTGT-TTAGGTGCGAGAACAG-----CAGGCA 44189
Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704
|||||||| ||||||||||||||||| || || || |||||||| || ||||| ||
Sbjct 44188 AGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACC 44129
Query 120705 GGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761
||||||| || || |||| | |||| |||| ||| ||| ||||| || ||
Sbjct 44128 AGGCATGAGACC--ACG-CTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAA 44072
Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821
| |||||| || |||||||| || | ||||| ||| ||||| | | |||| |
Sbjct 44071 GATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTAGACTCCTTGTCGGT 44012
Query 120822 GATCCACTTCATGGCCCACTCGGCCTT 120848
||||||||||| ||||| ||||||||
Sbjct 44011 GATCCACTTCAGAGCCCAGTCGGCCTT 43985
>seq576
Length=37320
Score = 113 bits (124), Expect = 4e-20
Identities = 132/176 (75%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| ||
Sbjct 12165 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 12107
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| ||||||||||| ||||| || || |||||||| |||||| |||
Sbjct 12106 GGCGAAAATGAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTAGACTT 12047
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
| | |||| || || | | |||||| |||| ||||| ||| ||||||||||
Sbjct 12046 AACGTTGTCAATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCA 11991
Score = 100 bits (110), Expect = 3e-16
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | ||||| || ||||| || ||||| || | ||| ||| | ||||||||
Sbjct 12914 AAATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCA-TCCTCGAG 12856
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || | ||||| ||||||||||| |||||||| || |||||||| |||
Sbjct 12855 TTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGAT 12796
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| || || | | ||| || |||| || | || |||||
Sbjct 12795 CTTGGACTTGACATTGTCAATAGTATCCGAAGACTCGACCTCGAGTGTAATAGTCTTGCC 12736
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || || || |||||
Sbjct 12735 CGTCAGGGTCTTGACAAAGATTTGCAT 12709
>seq492
Length=47418
Score = 102 bits (112), Expect = 8e-17
Identities = 138/190 (73%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||||||
Sbjct 44737 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCAAGCTGCTTGCC 44679
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | ||||||||||| || || ||||| |||||||| |||||| |||
Sbjct 44678 AGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 44619
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||| | | ||| || || | ||| | ||| || || ||||| ||
Sbjct 44618 GACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGT 44559
Query 133643 TTTTACGAAA 133652
|| ||||||
Sbjct 44558 CTTGACGAAA 44549
>seq1207
Length=77990
Score = 100 bits (110), Expect = 3e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || || ||||||||||| || || ||||| ||||||
Sbjct 69224 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 69165
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||| ||||| | || | ||||| | || ||| || |||| ||| |
Sbjct 69164 TCCTGAATCTTAGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATC 69105
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || || || || || || ||||||||||||||
Sbjct 69104 GTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 69070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483412309922200
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