Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq576 86.0 4e-12
>seq576
Length=37320
Score = 86.0 bits (94), Expect = 4e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | ||||| || ||||| || || || |||||||| |||||
Sbjct 12480 ACCACCACGCAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGGA 12421
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| || | || |||||||||||||| | |||||||||||| | ||
Sbjct 12420 CAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGATCCGGAGG 12361
Query 33642 CACACCTTCTTTGTC 33656
| ||| || || ||
Sbjct 12360 GATACCCTCCTTATC 12346
Score = 82.4 bits (90), Expect = 5e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | |||||||| ||||| || || || |||||||| || ||
Sbjct 12708 ACCACCACGCAGACGCAGAACCAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGA 12649
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| |||| || | || ||||| ||||| || | |||||||||||| | ||
Sbjct 12648 GAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGATCCGGAGG 12589
Query 33642 CACACCTTCTTTGTC 33656
| ||| || || ||
Sbjct 12588 GATACCCTCCTTATC 12574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328698371457600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |