Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq156 86.0 7e-12
>seq156
Length=66892
Score = 86.0 bits (94), Expect = 7e-12
Identities = 147/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183
||||||||||| ||||||||||| || |||||||||||||| || | | |
Sbjct 25466 ATGTGGCACGGTGGCAGCGCCATCTTCTTCAAATCCGCGGGGTTCCAAGCGGTCATAATG 25525
Query 147184 AGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACC-CACCTCAGCTGGTCCA 147241
| |||| | || | ||||| |||| | | | ||| ||| || | |||||| || |
Sbjct 25526 ATACGCC-GATCGTACGGGTTGGTCTTGAGTTTGTGGATGACCTCAGC-CAGCTGATCAA 25583
Query 147242 CGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACT 147301
| || |||||| |||| |||| | ||||||||| |||||| || || | |||||
Sbjct 25584 CACCTTGGCCCGTATAGTCTGTCTTGGCATCCACGTACTCGGCCCCGAAATGGCGCCACT 25643
Query 147302 GGAAGCCGTACACTGGCCCCAGGTCGCC 147329
| ||||| || || ||||| || |||||
Sbjct 25644 GAAAGCCATATACAGGCCCAAGATCGCC 25671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583477752492000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |