Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20albifundus_20[genbank_20GCA_5F000813685.1_202015-01-
02] 1,405 sequences; 26,875,327 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq539 150 2e-31
seq431 95.1 2e-14
seq564 87.8 2e-12
seq1 87.8 2e-12
>seq539
Length=40911
Score = 150 bits (166), Expect = 2e-31
Identities = 821/1295 (63%), Gaps = 17/1295 (1%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||||||||| | |||||| ||||| ||||| ||||| || |||| || || | |||
Sbjct 16540 GGTAGATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGATGTGC 16599
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
|||||| ||||| ||||| | || |||| || || | ||| | || || || |
Sbjct 16600 TGGCTGTAGGCATGGGTGCAACCAGAAGAGAATTGCGTACACCATGCTGTTTAATCTTCT 16659
Query 110826 CCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG 110883
|||| ||| | |||||| | | | | || || |||| | ||||||| ||||||||
Sbjct 16660 CCTTCAGAGAAGTCCAGTCCCACAGGTCA-CTAGGAGTCACAT-CCCACATATCAAACTG 16717
Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943
| | |||||||| | || ||||||||| ||||| || | ||| | | | ||
Sbjct 16718 CAAGATACCTTGGGAGACAGGGGAACCCTCATAGGTTGAGTAAGTACCCTCCGTCTGGGC 16777
Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003
| ||| || || | ||||| || ||||||||||| || | || |
Sbjct 16778 GATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGTTTGTTAAG 16837
Query 111004 CTCCTTGGCTTCATCTGAATC-AAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062
|| ||||| || || ||| || | |||| || || |||| || | |
Sbjct 16838 CTGGCGTGCTTCGGGGGATTCGAAAGGCAT-GCGGAGAGCAAGGAAAGCATCAGCCAAGC 16896
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGG 111122
| || ||||| | |||||| || | ||| ||||| || || | || || || |
Sbjct 16897 CCTGTACACCAACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAG 16956
Query 111123 GATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCAT 111182
| || ||| ||||||| |||||||| || ||||| | |||| ||| |
Sbjct 16957 GGTAGTGATTCACATCAATGATGCGGTTTAGGTTGCGAACAACAACTTGAGTGACTTCGT 17016
Query 111183 GAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTG 111242
| || |||| | | ||| | | | | | | || | |||||||| | |
Sbjct 17017 GTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCCAGAG 17076
Query 111243 ATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATA 111302
|||| | ||||| ||||| ||| || | ||||| | ||| || || || |
Sbjct 17077 ATGCTAGGTTGCACACAGCAACCTCGTCAGGGGCACAATACTCGATAATCTCAGTGCACA 17136
Query 111303 AGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCT 111362
||| || || || || || | ||| || || || ||||| |||||| || |
Sbjct 17137 GGTTTGAGCTGCGGATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAATGGTCTT 17196
Query 111363 TGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CA 111421
|||| |||||| | || | || ||||| ||||| | | ||||| || | ||| | |
Sbjct 17197 TGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGGGCCTCCAGAATGGCATACCACAGCT 17256
Query 111422 TCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCT 111481
|| | | || | |||| | | | || |||||| |||||||||| || || ||
Sbjct 17257 TCTGGGCCTTG-ACAACCGTGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCC 17315
Query 111482 TCAAACTCCTCACCCACCGCG-TCGGAGAGACCTGGTGCCTTGTCTGGA-CAGAAAAGAG 111539
|||||||| || || | || || | | || || || || ||| || | ||||
Sbjct 17316 TCAAACTCTTCGCC-ATAGCAATCCGCCAAGCCGGG-GCATTCATTGGGGCACATGAGAG 17373
Query 111540 ACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 111599
||| | || || |||||| ||||||||||| | ||| |||||||||| | |
Sbjct 17374 TCCAGTCCTCATTTTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGA 17433
Query 111600 AGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 111658
| || || | | ||| || | ||||| | || ||||| || || || ||||||||
Sbjct 17434 ATAGGTCACGAGCACGGA-CTTCTTCCTTTCCGTGGTTCTTGCGCAAGTCGAGGAACTCG 17492
Query 111659 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCA 111715
| || ||| || ||||||||||| || || | || | | ||| ||| |||
Sbjct 17493 AAGACATCAGCATGCCATGGCTCGAGGTAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCA 17552
Query 111716 GCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCT 111775
| || | ||||| || || ||| ||| || || || ||||| |||| ||||| |
Sbjct 17553 CCCTGGTCAACATAACGGGCAGTGTTGTTGAAAACACGTAGCATGGGAACGATACCGTTC 17612
Query 111776 GATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATC 111835
|| ||| || || || ||| ||| | |||| | | | |||| | |
Sbjct 17613 GAAGTACCGTTAGTACCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGGACATTGAGA 17672
Query 111836 CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCG 111895
|| ||||| |||||| ||| || || ||||| | | || || | || || ||
Sbjct 17673 CCGATACCGCCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCC 17732
Query 111896 TTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTA 111955
| ||| ||| || || || ||| |||||||| |||| ||| | || |||
Sbjct 17733 TCGATGCTGTCATCTTTCATGTCGACTAGGAAGCACGAAGACAACTGAGCCTGGGGGGTA 17792
Query 111956 CCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAA 111990
|||||||| ||||| || |||| ||||||| ||||
Sbjct 17793 CCAGCATTAAAGAGCGTAGGTGATGCGTGAGTGAA 17827
>seq431
Length=155802
Score = 95.1 bits (104), Expect = 2e-14
Identities = 338/522 (65%), Gaps = 11/522 (2%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| || ||||| || || ||||| || || ||||||||| |||||
Sbjct 44187 GCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAAATGAGCTCGTTTGAGAAGGTCAGACCA 44128
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||||||||| ||||| || ||| | || | | ||| | || ||||| |||||
Sbjct 44127 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCACCCGAGAAAAAGATG 44068
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACT--TTG-CATCA 122835
||||| ||| ||||| |||| ||||| | ||| || | ||||| ||| |
Sbjct 44067 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG---TAGACTCCTTGTCGGTG 44011
Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895
| ||| |||| ||||| | ||||| || || || | ||| | ||||| |
Sbjct 44010 ATCCACTTCAGAGCCCAGTCGGCCTTGCGACGGATGCAGGGAATAGTGTCAATGGCATTG 43951
Query 122896 AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTT 122955
|||| | | | || ||||| ||||| ||||||| | ||||| |||
Sbjct 43950 AATAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATTAGCAGCGAATAGGTT 43891
Query 122956 TCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTAT 123014
|| ||| | ||| ||| ||| | || | ||||||| | || || ||| ||
Sbjct 43890 TCAGAATGGATGTTTTCCATCATGATCTGGA-AACCGTAGAAGCACCGGGCCTCGGGAAT 43832
Query 123015 CTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 123074
||| ||||| | | || | | || || || || || ||||| || ||||
Sbjct 43831 CTGCACCTCGCCTGAGAAGCGCTCAACGAGGTTTTCGTTGACGATGCCATCAGAGGCAGC 43772
Query 123075 AAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCA 123131
|||||| || || |||| ||||| | || || | | |||| || | |||||
Sbjct 43771 AAAGAAGGCGAGAATGTGGGAGATGAAGTACTGCTCGTCCTTGTTCAGACGGTTGTTCCA 43712
Query 123132 GTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 43711 GTCGTGGAGATCCTTGGAGAGATCAATCTCTTCAGCAGTCCA 43670
>seq564
Length=132701
Score = 87.8 bits (96), Expect = 2e-12
Identities = 210/313 (67%), Gaps = 10/313 (3%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
||||||||||| ||||| |||| || ||||| || | ||| || | |||| |||
Sbjct 130105 GCATCAATCTCGTCAATAAAGATGATGCATGGCGCGTTCTTGCGCGCCGTAGCAAAAAGA 130046
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGT--TTGCGGCAGAGC 11747
|| || || | | ||||| || ||||||||||| ||||| | || || || |
Sbjct 130045 TCACGCACTCGCGACGGGCCCACGCCGACAAACATCTCGACAAACTCGGAGCCGCTGA-C 129987
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
||| || ||| || || ||| || || || |||| || || || ||||| ||||
Sbjct 129986 ACT-GAAGAAGGGAACGCCTGACTCGCCAGCCGTGGCCTTTGCTAGCAGCGTCTTGCCCG 129928
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC---ACTTCCAAAAT 11864
| || || |||| || | ||||| || |||||||||||||| || |||| |
Sbjct 129927 TTCCCGGGGGGCCCGATAGGATAGCGCCACGCGGGATCTTGGCACCCAGACGCACAAACT 129868
Query 11865 ATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAA 11924
| ||||| | |||||| || | ||||| ||| | || | |||||| | || |
Sbjct 129867 ---TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATCTCGACCTTGGCCTCATCCA 129811
Query 11925 TCCCCTCAACATC 11937
|||| | |||||
Sbjct 129810 TCCCAGCCACATC 129798
>seq1
Length=236255
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 164658 GGTGCGGGTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCAC 164717
|| || ||||| |||||| |||| || ||||| ||||| || | | |||||||||
Sbjct 196554 GGAGCTGGTGTCATTGATGCCGATTACCGTGGTGAGGTCAAGGTTCTCTTGTTCAATCAC 196495
Query 164718 GGAGACAAAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 164777
||| ||||| ||||| || | || || |||||||| || || || | || ||
Sbjct 196494 CACGACGCCGACTTCGAGGTCAAAGAGGGCGACCGCATCGCTCAGCTAGTGTTGGAACGT 196435
Query 164778 TGTGAAACACCCGATGTGGAGGAAATTGGTGTTCTTGAAGAGACGGAGAGAGGTGCGGGT 164837
|| ||| |||||||| | || ||| |||||||||||||| | | || || |||
Sbjct 196434 ATTGTAACTCCCGATGTTGTCGAGGTTGCTGTTCTTGAAGAGAGTGTCCGTGGAGCTGGT 196375
Query 164838 GGATTTGG 164845
|| |||||
Sbjct 196374 GGTTTTGG 196367
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628020970188000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |