Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq249 84.2 2e-11 >seq249 Length=99862 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||||||||| ||||||||| |||| || || | Sbjct 88355 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 88296 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || || ||||| || ||| | || || || Sbjct 88295 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGACCAG 88236 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || ||||| || || || || || || ||| | || | |||| ||||| Sbjct 88235 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 88176 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 || |||||||| |||||||||||| |||| Sbjct 88175 ATCCAGAAGGAGTCTACTCTTCACTTGGT 88147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330993689145