Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq598 257 1e-63
seq209 165 7e-36
seq753 105 6e-18
seq249 86.0 6e-12
>seq598
Length=260485
Score = 257 bits (284), Expect = 1e-63
Identities = 632/951 (66%), Gaps = 8/951 (1%)
Strand=Plus/Minus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|| || || ||||| || || ||||| || || |||||| | ||| || || ||
Sbjct 23344 GATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAC 23285
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| || || || || || | ||| |||| ||||| || || ||||| ||
Sbjct 23284 AGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCT 23225
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
||||||||||| | || |||| ||||| ||| | ||| | || || |||||
Sbjct 23224 TTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGT 23165
Query 23207 GTCTGAGCGTGAACA--CGT-CGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAAC 23263
|||| || | ||| | | || || | ||| |||| |||||||||| ||||
Sbjct 23164 TTCTGGGCCTTGACAACCATGCGACCGCGAC--CCTCCTTC-TCGTACTTTTCATACAGA 23108
Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGA 23323
|| ||||| || | || || || || |||| |||||| ||| | || |||||||||
Sbjct 23107 GCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGA 23048
Query 23324 CTCCACAT-TGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382
|||| | | || || ||||| || |||| || | || ||||| || || |
Sbjct 23047 GTCCAGTCCTCATTC-TTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAA 22989
Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442
||| || || || || || || || || || ||| |||||| || || | || ||
Sbjct 22988 GAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTC 22929
Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502
|| || || |||||||| |||||||| |||| |||||| || || |||| ||| || ||
Sbjct 22928 GAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCC 22869
Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562
||||| || || |||||||| ||||||||| | || | |||||| || |||| |||||
Sbjct 22868 ACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTT 22809
Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622
|| | ||| ||| || | || || | || |||| |||||| | ||
Sbjct 22808 CGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAG 22749
Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682
||| || || || || || || ||||| || || || || || ||||| |||||
Sbjct 22748 ACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCC 22689
Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742
|||||||||||| || || | |||| | |||||| ||||||| || || | ||| ||
Sbjct 22688 CTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGT 22629
Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802
| |||| || || || || ||||| || ||| | | ||||| || |||||
Sbjct 22628 ACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACATAAGGTTGTA 22569
Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862
|| || | | ||| | | || || ||||| | || || ||||| |||||
Sbjct 22568 GGTTTCAAGCACACGATCGACTTTGTCACCCCAAATACCCACAGCAACACGCATTATCAT 22509
Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922
|| || || | ||| || | || | || ||||| || || ||||| | | |||
Sbjct 22508 GTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGT 22449
Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
||||| ||||| || | ||||| |||||||| |||| ||| ||||| ||
Sbjct 22448 CTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGA 22398
Score = 111 bits (122), Expect = 1e-19
Identities = 167/232 (72%), Gaps = 9/232 (4%)
Strand=Plus/Minus
Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAAC 22510
|||| || || || |||||||| | ||||| ||||||| |||||||||||||||||| |
Sbjct 23919 GGTTGACGACCTGGAACTCGCCAG-CAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAG 23861
Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570
|||||||| | |||||||| ||||| ||||| | || || || ||||| || ||
Sbjct 23860 GGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 23801
Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGT 22628
| || || || || | | || |||| || | || | || | ||| | | |||||
Sbjct 23800 ACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAA--GTCCAGT 23743
Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC 22680
||||||| || || |||||| ||||||||||| | ||||| | |||
Sbjct 23742 CCCACAGGTCACTAGGAGTCACA---TCCCACATATCAAACTGCAAGATGCC 23694
>seq209
Length=70751
Score = 165 bits (182), Expect = 7e-36
Identities = 550/842 (65%), Gaps = 33/842 (4%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||| | || || | || |||
Sbjct 41972 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTG 41913
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
||||||||||| ||| ||| | || | || || ||| | || ||
Sbjct 41912 TCTAAGGATCTCCACGACTGGAACAACCGTCTGAACAAAGACGAGCAGTACTTCATCTCC 41853
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||| | | || || || || || || ||||| || || ||||| ||| | || || |
Sbjct 41852 CACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCGC 41793
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| ||| || ||||| | | ||||| | ||||| || || || || | ||
Sbjct 41792 TTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTATGGTTTCCAGATCATGATG 41733
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864
|||||| | || || |||| || ||||| || || || || ||| | ||||| | ||
Sbjct 41732 GAAAACATCCACTCTGAAACCTACTCGCTGCTGATTGACACCTACATCAAGGAGCCCTCG 41673
Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924
| | || || |||||||| || || || || || ||| ||| | ||||| |
Sbjct 41672 -CAACGCACATAC-CTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCG 41615
Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCG 57981
| ||| | | || ||||| | || || || | ||||| ||| || | ||| | |
Sbjct 41614 ACTGGGCTCTGAAGTGGATCAC---CGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTG 41558
Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041
| || || || ||||| || || || || || ||| ||| || | || || ||| ||
Sbjct 41557 CCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTGC 41498
Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101
|| || || || ||||| || ||||| || |||||| | || || || || ||||
Sbjct 41497 GCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAGG 41438
Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161
| || || || || ||||| ||||| ||| ||| || | | || || ||| | | |
Sbjct 41437 GCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCGCA---TCTGAACAA-CCGCCCCAGC 41382
Query 58162 ATCGCATCTTGGACA-----TTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| | | |||| || | ||||| || || |||| |||||| || ||||| | ||
Sbjct 41381 AAGG-ACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGAC 41323
Query 58217 CGAAGCCCTACCG-GTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275
||| || || || | || | |||| || |||||| |||| ||||| |||||||||
Sbjct 41322 CGAGGCTCTGCCCTGCGGTC-TGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTG 41264
Query 58276 AGTTTGTTGCCGACAGAC----TTTTGCTCGAACTGATTGGAGAGCGTCATTACAACACG 58331
|||||||||| ||| | | | |||||| | | |||| || ||| |
Sbjct 41263 AGTTTGTTGCTGACCGCCTGCTTGTTGCTCTA--GGCAACGAGAAGGT--GTACCGTGCC 41208
Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAA 58391
| ||| || || || || ||| | |||||||||| |||||||| ||||| |||||
Sbjct 41207 ACAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTCGAG 41148
Query 58392 AA 58393
||
Sbjct 41147 AA 41146
>seq753
Length=27693
Score = 105 bits (116), Expect = 6e-18
Identities = 118/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| ||||| || || || || ||||| ||| |||| ||||| |
Sbjct 10933 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 10874
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| | || ||||||||| ||| | || || |||
Sbjct 10873 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 10814
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || ||||||||||| ||| |||| ||
Sbjct 10813 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGA 10776
>seq249
Length=99862
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 31205 GTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAA 31264
|| ||||| || || || || || || ||| |||| || || | ||||||| | ||
Sbjct 88571 GTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTGAC 88512
Query 31265 ACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324
| ||||| | || ||||||||| ||| | || || |||||||||||||| ||
Sbjct 88511 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCATC 88452
Query 31325 TTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAA 31384
||||| || || ||| | || || || | ||| || |||||||| ||||||
Sbjct 88451 TTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCCGACTACAACATTCAGAAAGAA 88392
Query 31385 TCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| |||||||| |||| || | ||| | || ||||
Sbjct 88391 TCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGGTA 88355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445761056375280
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