Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq598 84.2 3e-11 >seq598 Length=260485 Score = 84.2 bits (92), Expect = 3e-11 Identities = 209/317 (66%), Gaps = 3/317 (1%) Strand=Plus/Minus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | |||||||| || || || | || | | |||||| | |||||||| Sbjct 24268 TCCTGGTCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGCAAGTAGTACATG 24209 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 ||||| || ||||| || |||| || ||| ||||| || || | ||| | Sbjct 24208 CCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 24149 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 |||||| || || || || | ||| || ||| || ||||| || || | || ||| Sbjct 24148 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 24089 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066 ||||||| | | || || | ||| ||||||| || || || | |||||| Sbjct 24088 GCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTAATA 24029 Query 65067 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123 || | |||| | | | | ||||||||||| ||| || || ||||| | |||||| Sbjct 24028 TCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTCTTC 23969 Query 65124 ATCTCATCATTCCATAA 65140 || | ||| |||||| Sbjct 23968 ATATTGTCAGACCATAA 23952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164910153560