Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq598 178 2e-39
seq209 134 2e-26
>seq598
Length=260485
Score = 178 bits (196), Expect = 2e-39
Identities = 1325/2111 (63%), Gaps = 49/2111 (2%)
Strand=Plus/Minus
Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765
|||| ||| | |||||||| || || || | || | | |||||| | ||||||||
Sbjct 24268 TCCTGGTCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGCAAGTAGTACATG 24209
Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825
||||| || ||||| || |||| || || ||||| || || | ||| |
Sbjct 24208 CCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 24149
Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885
|||||| || || || || | ||| || ||| || ||||| || || | || |||
Sbjct 24148 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 24089
Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945
||||||| | | || || | ||| ||||||| || || || | ||||||
Sbjct 24088 GCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTAATA 24029
Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002
|| | |||| | | | | ||||||||||| ||| || || ||||| | ||||||
Sbjct 24028 TCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTCTTC 23969
Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062
|| | ||| |||||| ||| || | | ||||| || || || ||
Sbjct 23968 ATATTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGGAGCCAGGGGTTGACGACC 23909
Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122
|| || || |||| | || | || |||||| || || || ||||| | |
Sbjct 23908 TGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCGAAGCAC 23849
Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182
||||| || |||| ||| || | || || || ||||| ||||| || | | | |
Sbjct 23848 TCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAA 23789
Query 79183 TTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241
|| | | ||| | || | | || || || |||||||| ||| ||||| || |||
Sbjct 23788 TTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGGTCACT 23730
Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGTGT 79300
|| |||| ||| | |||| | || | || || || || | || || |
Sbjct 23729 AGGAGTCACATCCCACATATCAAACTGCAAGATGCC-TTGGGAGACAGGAGAACCCTCAT 23671
Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360
| ||| |||| || ||| | | ||| | ||| || || ||| ||| |
Sbjct 23670 AAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGT 23611
Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420
| |||||||| ||||||| ||| ||||| | ||||||| || ||||| || |
Sbjct 23610 AGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGC-ATG 23552
Query 79421 TTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479
|||| || || ||||| || | || || ||||| | ||| || || | || | |
Sbjct 23551 CGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGC 23492
Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539
| || | | |||||| | | ||| || | ||| | ||| || || || ||
Sbjct 23491 ATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGG 23432
Query 79540 TTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTCCATCTAT 79598
|| | || | |||| | || || | ||| || ||| ||| | || || | |
Sbjct 23431 TTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTG 23372
Query 79599 TA-----CAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 79653
|| | || | || | |||||| || || || || || ||||||| ||
Sbjct 23371 TAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGG 23312
Query 79654 TCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGT 79713
| || | || || |||||||| ||||| || |||||| |||| |||||
Sbjct 23311 GCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTC 23252
Query 79714 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATC 79773
||||| ||||| ||| || || || || || || || || | ||||| ||| ||
Sbjct 23251 TGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTC 23192
Query 79774 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGT-ATCTCT 79831
|||| || | ||| || | ||| | | || | ||||| | | | || | | |
Sbjct 23191 TGAGCCTCCAGAATGGCATACCACA-GTTTCTGGGCCTTGACAAC---CATGCGACCGCG 23136
Query 79832 TTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889
||| ||| ||| | | ||| | || ||||| || || | ||| | ||
Sbjct 23135 ACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAA 23076
Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949
|| || ||||| | || ||||| | | ||| || ||| | || || || |||||
Sbjct 23075 GCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCAT 23016
Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009
|| | || ||||| || || | ||||| || | | | || || |||||
Sbjct 23015 GAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCC 22956
Query 80010 TGTATTCTTTT-TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068
||||| |||| ||||||||| | | | ||||| |||||| || || | || |
Sbjct 22955 GTGGTTCTTGCGTAAG-TCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAA 22897
Query 80069 TGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 80128
|||| | |||| ||||| |||||||| ||||| || | || | |||||||| ||
Sbjct 22896 TGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGA 22837
Query 80129 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 80188
|||| | | ||| |||| || || || || ||||| || || || | || || |
Sbjct 22836 AAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGC 22777
Query 80189 CACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246
|| ||||||||||| | |||| ||||| || || || ||||| || || || |
Sbjct 22776 CAGTGGCACGAATACGGTGAACATTG--AGACCGATACCACCAGCCATCTTGGAAATCAT 22719
Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306
|| || || | ||||| || |||||||| ||||| ||||| |||||| | |||
Sbjct 22718 GGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAG 22659
Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366
||||| ||||| || | ||| || |||||||| | ||||| || |||||
Sbjct 22658 GAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTG 22599
Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA-TAGCTGAT--TCTAT---ATC 80420
|| || | || ||||| || ||||| || |||| | ||| || | | |
Sbjct 22598 AGTGAAGAACTTGCTAGACATAAGGTTGTAGGTTTCAAGCACACGATCGACTTTGTCACC 22539
Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480
||| ||| || || || |||||||||| ||||||||| || | ||||| |||||
Sbjct 22538 CCA------AATACCCACAGCAACACGCATTATCATGTGCTGGGGACGCTCAACAATCTT 22485
Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 80540
|| | ||| | | ||| || || | || ||||| ||||| || | |||
Sbjct 22484 ACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGTCTTAAAGCCAAAGTACTGGTAGTT 22425
Query 80541 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 80600
||||| || ||||| | ||| | |||| || | |||||| | ||| | ||
Sbjct 22424 GAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCATCCTTGTGACGCATAA-TGCACT 22366
Query 80601 CATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658
||| || ||| || || || || || ||| | || || |||||||||| |
Sbjct 22365 CAT-ATGTCTCTTTGGAGATCATAGGGGAGGCTTTACGGTTCGCGGGGTTAACATAGTGG 22307
Query 80659 AATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATAC 80717
| | || || ||| || | || | || || |||| |||||| ||||| || ||
Sbjct 22306 TAAAGGTCAGACACCAC-CGACGACCATTGCTTCTTGGTTTGCTTGTGAAGATTAGAGAC 22248
Query 80718 GGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTA 80776
|| || | |||||| | ||||||||||| ||||| |||| | || || ||| ||
Sbjct 22247 AGCAATACGGGCGGCCAGGATGGCATAATCGGGATG-TGTGACGGTCATGTAGGCGGCAG 22189
Query 80777 TTTCGGCTGCC 80787
||||||| |||
Sbjct 22188 TTTCGGCGGCC 22178
>seq209
Length=70751
Score = 134 bits (148), Expect = 2e-26
Identities = 374/570 (66%), Gaps = 14/570 (2%)
Strand=Plus/Plus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || || || || ||| |||||| ||||| || | | ||| || ||||| ||
Sbjct 41407 AACAGCAGGCAAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAG 41466
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || || || ||||| || |||||||| ||||| || ||||| || || | ||
Sbjct 41467 AAGGTCAGACCAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCT 41526
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127
|| || ||||| || || || || ||||||||||| || | || || | | | |
Sbjct 41527 GAGAAAAAGATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCC 41586
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187
|||| |||||||| ||||||| |||||||| | || || || || ||
Sbjct 41587 TTGTCGGTGATCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCA 41646
Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAA 50243
|||||||| || || || | | | || | | || || | || || || ||||
Sbjct 41647 ATGGCATTGAACAGGTA----TGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAG 41702
Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303
|| || |||| || || |||||||| || ||||| || || ||||| || |
Sbjct 41703 CAGCGAGTAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCATAGAAGCAGCG 41762
Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363
||||||| |||||||| || | || || ||| | | |||||| || || || ||
Sbjct 41763 GGCCTCGGGGATCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCC 41822
Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCG--TTGGGTGTT 50421
||| ||| ||||| || || | | || || || | | ||| || | |
Sbjct 41823 ATCAGAGGCAGCAAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAG 41882
Query 50422 A-GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480
| | || ||||| || | || ||| ||||| | ||| | || || | ||||| || ||
Sbjct 41883 ACGGTTGTTCCAGTCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGA 41942
Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGAT 50510
||||| ||||| || ||||| | ||||||
Sbjct 41943 GGCCTCGGCCTTCTTGTACATCTGCCAGAT 41972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718260189752760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |