Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq633 93.3 4e-14 >seq633 Length=276838 Score = 93.3 bits (102), Expect = 4e-14 Identities = 121/162 (75%), Gaps = 8/162 (5%) Strand=Plus/Plus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCG---TTGTGGCCGAAGTTGAA 5649 ||||| || || ||||||||| ||||| |||||||| ||| | ||| || ||||| Sbjct 261852 AGCTGAGCAATGCGGTCGCCC-TCTTTGACCTCGAAGTCGGCATCATGGT-GA--TTGAA 261907 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||| | || || | ||| ||||| ||||| || || || || || || ||||| Sbjct 261908 CAGGAGAACCTTGACTTCGCCACGGTAATCGGCATCAATGACACCAGCACCGGTATCGAT 261967 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||||| | |||||||||||||||||||| | |||||| Sbjct 261968 GAAGTGCTTAGCAGCCAGGCCGGAGCGGGGAGCGATGCGGCC 262009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430049373604808