Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq598 401 2e-106 >seq598 Length=260485 Score = 401 bits (444), Expect = 2e-106 Identities = 1170/1782 (66%), Gaps = 26/1782 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449 || || | ||||||| | ||| || |||||| ||| | | ||||| | |||||||| Sbjct 22437 TTTGGCTTTAAGACGCTCGAGCGTTCGTACCTA-CTCAAACTTGATGGTAAGATTGTTGA 22495 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT---GTTGA 363506 || || ||||| ||| |||||||||||||| | ||||| ||| || || || Sbjct 22496 GCGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTAT---TTGGGGTGACAAAGTCGA 22552 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACGCCACGCCAA 363565 | | | ||||||| || || ||| | | || || | ||||| ||||| | || | Sbjct 22553 TCGTGTGCTTGAAACCTACAACCTTATGTCTAGCAAGT-TCTTCACTCACGCATCACCTA 22611 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||||| || |||| | | ||| ||||||| || || || | | |||| Sbjct 22612 CGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGA 22671 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || ||||||||| || | || || || |||| |||||| | |||||||||| Sbjct 22672 AGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGA 22731 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 || || || || ||| | | ||| | ||||||| || | | ||||||| Sbjct 22732 TGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGG-CTCTTACATTGCT 22790 Query 363745 GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||| || |||| |||| || | ||||||||||| ||||| || |||| || || Sbjct 22791 GGCACTAACGG-TACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGC 22849 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | || || |||||||||||| ||||| || || ||||| || ||||||||||| Sbjct 22850 CCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCC 22909 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||| ||| | || ||||| || || | || || ||| ||||| || ||| | Sbjct 22910 ATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGT 22969 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| ||||| || |||| || || ||| | | ||| || |||||||| || || Sbjct 22970 CCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGA 23029 Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 | | || | ||| | ||| | ||||| | ||||| || || | | ||| | Sbjct 23030 GAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTA 23089 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 || || || | || ||||| || |||||||| || |||||| | ||| | | Sbjct 23090 TGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCGGTCGCATGGT 23149 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 | || ||||| || |||| |||||| |||| | |||| |||||| || | || Sbjct 23150 TGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCC 23209 Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 | |||| | |||||||| |||||||||||| ||| ||| | | || ||||| || Sbjct 23210 TTTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCAT 23269 Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || |||| | ||||| || || |||||||| || ||| || || || ||| || | Sbjct 23270 TC-GCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTG 23328 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTG 364336 | || ||||| || || | || ||||| | || || || | ||| | || Sbjct 23329 TGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGTGGACTACAACAAGGGTGAGTATG 23388 Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 || | | || | || || ||| | || | | |||| || || | |||| Sbjct 23389 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 23448 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 | |||| | || || | | ||||| | || ||||| || || || |||| Sbjct 23449 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 23508 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516 || | |||||||||||||| ||||||| ||| | ||| ||| | ||||| || | Sbjct 23509 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 23568 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 |||| || || || || ||| |||| |||||||| || || |||||| | |||| Sbjct 23569 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 23628 Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636 |||| || | || | || |||| | ||||| ||||||||||| || ||| | | Sbjct 23629 CTTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCT 23688 Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696 | || || | || ||||||||| | ||| |||| || || || || ||| ||||| Sbjct 23689 CCCAAGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGACCTGTGGGACTGGA 23748 Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 | | ||| || ||||| |||||||| ||||| || || | || |||| Sbjct 23749 CTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCA 23808 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||| || || || | ||||| || || ||||| |||||||||||||| | ||| Sbjct 23809 TGCCTACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTACACAT 23868 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| |||| ||||| |||||| | || || || | ||| || || | || Sbjct 23869 CCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTCC 23928 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936 | || || ||| | || | ||| ||||| |||||||| || || || | Sbjct 23929 TACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAATATGAAGAATCGCATTATTGCGG 23988 Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995 ||||| || | |||||||| || || | |||| | ||| | || || | ||||| Sbjct 23989 ACAATGGCTCCATTCAGAACATCTCTAGCA-TTCCTGCTGATATTAAAGCTCTGTACAAG 24047 Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055 ||||| ||||| |||||| ||| || | | | ||||| || ||||| |||||||| Sbjct 24048 ACCGTTTGGGAGATTTCCCAGCGTACAGTTGTGCAAATGGCTGCTGATCGTGGTGCTTTC 24107 Query 365056 ATCTGTCAGAGC-CAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114 || || | | | ||||| | ||| | ||||| | || ||| | |||| | || Sbjct 24108 AT-TGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCCACCATGGGCAAGATCAC 24166 Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| || || |||||| ||||| ||||| || Sbjct 24167 CAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGG 24208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303337585449938