Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq598 401 2e-106
>seq598
Length=260485
Score = 401 bits (444), Expect = 2e-106
Identities = 1170/1782 (66%), Gaps = 26/1782 (1%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449
|| || | ||||||| | ||| || |||||| ||| | | ||||| | ||||||||
Sbjct 22437 TTTGGCTTTAAGACGCTCGAGCGTTCGTACCTA-CTCAAACTTGATGGTAAGATTGTTGA 22495
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT---GTTGA 363506
|| || ||||| ||| |||||||||||||| | ||||| ||| || || ||
Sbjct 22496 GCGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTAT---TTGGGGTGACAAAGTCGA 22552
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACGCCACGCCAA 363565
| | | ||||||| || || ||| | | || || | ||||| ||||| | || |
Sbjct 22553 TCGTGTGCTTGAAACCTACAACCTTATGTCTAGCAAGT-TCTTCACTCACGCATCACCTA 22611
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| | | ||||| || |||| | | ||| ||||||| || || || | | ||||
Sbjct 22612 CGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGA 22671
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
|||| || ||||||||| || | || || || |||| |||||| | ||||||||||
Sbjct 22672 AGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGA 22731
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744
|| || || || ||| | | ||| | ||||||| || | | |||||||
Sbjct 22732 TGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGG-CTCTTACATTGCT 22790
Query 363745 GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||| || |||| |||| || | ||||||||||| ||||| || |||| || ||
Sbjct 22791 GGCACTAACGG-TACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGC 22849
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || || |||||||||||| ||||| || || ||||| || |||||||||||
Sbjct 22850 CCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCC 22909
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||||| ||| | || ||||| || || | || || ||| ||||| || ||| |
Sbjct 22910 ATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGT 22969
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| ||||| || |||| || || ||| | | ||| || |||||||| || ||
Sbjct 22970 CCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGA 23029
Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
| | || | ||| | ||| | ||||| | ||||| || || | | ||| |
Sbjct 23030 GAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTA 23089
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103
|| || || | || ||||| || |||||||| || |||||| | ||| | |
Sbjct 23090 TGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCGGTCGCATGGT 23149
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
| || ||||| || |||| |||||| |||| | |||| |||||| || | ||
Sbjct 23150 TGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCC 23209
Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
| |||| | |||||||| |||||||||||| ||| ||| | | || ||||| ||
Sbjct 23210 TTTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCAT 23269
Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| |||| | ||||| || || |||||||| || ||| || || || ||| || |
Sbjct 23270 TC-GCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTG 23328
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTG 364336
| || ||||| || || | || ||||| | || || || | ||| | ||
Sbjct 23329 TGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGTGGACTACAACAAGGGTGAGTATG 23388
Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
|| | | || | || || ||| | || | | |||| || || | ||||
Sbjct 23389 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 23448
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
| |||| | || || | | ||||| | || ||||| || || || ||||
Sbjct 23449 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 23508
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516
|| | |||||||||||||| ||||||| ||| | ||| ||| | ||||| || |
Sbjct 23509 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 23568
Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576
|||| || || || || ||| |||| |||||||| || || |||||| | ||||
Sbjct 23569 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 23628
Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636
|||| || | || | || |||| | ||||| ||||||||||| || ||| | |
Sbjct 23629 CTTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCT 23688
Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696
| || || | || ||||||||| | ||| |||| || || || || ||| |||||
Sbjct 23689 CCCAAGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGACCTGTGGGACTGGA 23748
Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756
| | ||| || ||||| |||||||| ||||| || || | || ||||
Sbjct 23749 CTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCA 23808
Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816
|||| || || || | ||||| || || ||||| |||||||||||||| | |||
Sbjct 23809 TGCCTACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTACACAT 23868
Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876
||| |||| ||||| |||||| | || || || | ||| || || | ||
Sbjct 23869 CCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTCC 23928
Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936
| || || ||| | || | ||| ||||| |||||||| || || || |
Sbjct 23929 TACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAATATGAAGAATCGCATTATTGCGG 23988
Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995
||||| || | |||||||| || || | |||| | ||| | || || | |||||
Sbjct 23989 ACAATGGCTCCATTCAGAACATCTCTAGCA-TTCCTGCTGATATTAAAGCTCTGTACAAG 24047
Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055
||||| ||||| |||||| ||| || | | | ||||| || ||||| ||||||||
Sbjct 24048 ACCGTTTGGGAGATTTCCCAGCGTACAGTTGTGCAAATGGCTGCTGATCGTGGTGCTTTC 24107
Query 365056 ATCTGTCAGAGC-CAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114
|| || | | | ||||| | ||| | ||||| | || ||| | |||| | ||
Sbjct 24108 AT-TGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCCACCATGGGCAAGATCAC 24166
Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||||| || || |||||| ||||| ||||| ||
Sbjct 24167 CAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGG 24208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303337585449938
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |