Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq249 141 9e-29 seq209 129 6e-25 seq598 125 7e-24 seq330 116 3e-21 seq753 113 4e-20 >seq249 Length=99862 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||| || || || | || |||||||| || |||||||| ||| Sbjct 88128 GCCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 88187 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| |||||||| || ||| |||| | |||||||||||||||||| Sbjct 88188 GAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 88247 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || ||| || ||||| | || | ||||| | |||||||| Sbjct 88248 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGAC 88307 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| || || || | || || ||||| || ||||| Sbjct 88308 TTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 88355 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||||| ||| | || |||||||| ||||||||||| ||| | Sbjct 88641 CCACCACGCAGGCGGAGCACTAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 88700 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||||||||||||| Sbjct 88701 AGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 88760 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | |||||| | |||||| | Sbjct 88761 ATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCCGAGGACTCCACC 88820 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 88821 TCGAGGGTGATGGTCTTGCCAGT 88843 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || || || ||||||||||| ||| Sbjct 88357 CCACCACGCAGACGCAGGACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCGGAA 88416 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | |||||||||||||||||| Sbjct 88417 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGA 88476 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||||| Sbjct 88477 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCGACT 88536 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 |||| ||||| ||| || ||||| || || || || Sbjct 88537 TCGAGGGTAATGGTCTTTCCGGTAAGGGTCTTGAC 88571 >seq209 Length=70751 Score = 129 bits (142), Expect = 6e-25 Identities = 356/539 (66%), Gaps = 15/539 (3%) Strand=Plus/Minus Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAG 46122 ||| | ||||| |||| ||| || ||| | ||| || |||||||||| ||||| Sbjct 41660 CTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAG 41601 Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182 ||||||| | || |||| || ||| |||| | || |||||||| ||| ||| Sbjct 41600 TGGATCACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAG 41541 Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT-TTACATCAAAACCAAGGGCATCAT 46241 ||| ||||||| || ||| || ||| ||||||| | | | || | || | |||| Sbjct 41540 GGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTC-TCAT 41482 Query 46242 GCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTT 46301 ||| || ||||| || |||||||| || || || || ||||||||||| || ||||| Sbjct 41481 GCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTT 41422 Query 46302 TGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCC-----CGACACCGTG 46356 ||| || || || | ||||| | | |||| | || || ||| ||| Sbjct 41421 TGCTTG--CCTGCTGT---TCTCGCAT-CTGAACAACC--GCCCCAGCAAGGACCTTGTG 41370 Query 46357 CTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC 46416 | | || ||| || || || | || ||||||||||| | || | || |||||| Sbjct 41369 CAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTGCCC 41310 Query 46417 GCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGAC 46476 | ||||| || |||||||| | ||| | ||||| |||||||| || ||| Sbjct 41309 TGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGAC 41250 Query 46477 CGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTT 46536 || ||||| || || | | |||| | | || || || || || || Sbjct 41249 CGCCTGCTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGACTTC 41190 Query 46537 ATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| | |||||||| || | ||||| ||||| || ||||| ||||| |||||||| || Sbjct 41189 ATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTCGAGAAGCGTGTCGGCGACTA 41131 >seq598 Length=260485 Score = 125 bits (138), Expect = 7e-24 Identities = 699/1111 (63%), Gaps = 11/1111 (1%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | || || ||| || | ||| || ||| ||||| Sbjct 23917 TTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGT 23858 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || |||||||| || || | || | || || |||||| || || Sbjct 23857 TCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACT 23798 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | |||||||| | || |||| ||| || | |||||||| | | ||| ||||| Sbjct 23797 AGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCAC 23738 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | | || |||| |||||||| || ||||||| ||||| | | | | || Sbjct 23737 AGGTCACTAGGAGTCACATCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGAGAA 23678 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | | | | |||| | ||| || | ||||| || || || ||| Sbjct 23677 CCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCG 23618 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 || || || || || ||| ||| |||||||| | |||||| | || | Sbjct 23617 GCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAA 23558 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 |||||||| || | ||||| || || || ||||||| || || || ||||| || Sbjct 23557 GGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGG 23498 Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537 || ||||||||| | || || || ||| || |||| ||||| || Sbjct 23497 TGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGG 23438 Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCC 145597 || | ||| || || || || | || | | | | ||||| ||||||| || | || Sbjct 23437 TTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCC 23378 Query 145598 TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCC 145657 | || | |||| || | | ||| | || || | || || || || ||| Sbjct 23377 TTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCA 23318 Query 145658 TCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717 || | | | | ||| | | ||||| | ||||| || || ||||| || ||| Sbjct 23317 TCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGA 23258 Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777 |||| |||||| || || | |||||| ||| ||||||||||| | || ||||||| Sbjct 23257 TTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTC 23198 Query 145778 TCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGC-TGCTGGTA 145836 || ||| | ||||| || | || | ||| || || | ||| | Sbjct 23197 TCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTGACAACCATGC-GACC 23139 Query 145837 GCGGCCCTCTTCTTCGTA--TTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCG 145894 ||| ||||| | ||||| |||| | |||| |||||||| | || |||||||| Sbjct 23138 GCGACCCTCCTTCTCGTACTTTTCATACAGAG--CCTCAAACTCTTCGCCATAGCAATCC 23081 Query 145895 GACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGC 145954 | || |||||| || | ||||| ||||| || | ||| | | || | || ||| Sbjct 23080 GCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGC 23021 Query 145955 TCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCA 146014 | ||| ||||| || | |||||| || | | | ||| || || | || || Sbjct 23020 TTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCC 22961 Query 146015 GCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTTCAAT 146073 || ||| | || | | | | || | | ||| || || ||||| || || | Sbjct 22960 TTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGA-AGACATCAGCATGCCATGGCTCGAG 22902 Query 146074 ATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCATGTT 146130 ||| | ||| | |||||| ||| ||| ||||||||||| || | ||| | |||| Sbjct 22901 ATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTT 22842 Query 146131 GTTAAAGACGCGCACCATGGGCTCGACGCCG 146161 ||| || || || | |||||| ||| |||| Sbjct 22841 GTTGAAAACACGTAGCATGGGAACGATGCCG 22811 >seq330 Length=314808 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | || | ||| |||||||| || |||||||| ||| | Sbjct 237243 CCACCACGCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 237184 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| || |||||||||||||| || Sbjct 237183 AGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGA 237124 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 237123 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 237064 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 || | ||||| ||| ||||| || || || || |||||| Sbjct 237063 TCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 237025 >seq753 Length=27693 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| || || ||| || ||||| ||||||||||| ||| ||| Sbjct 10741 CCTTCTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 10800 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| || || ||||| | | Sbjct 10801 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 10860 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| || | |||||| | |||| ||||| || ||||| || || || || |||| Sbjct 10861 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 10920 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 10921 AAATCTGCAT 10930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007141746560