Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq249 141 9e-29
seq209 129 6e-25
seq598 125 7e-24
seq330 116 3e-21
seq753 113 4e-20
>seq249
Length=99862
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| |||||| || || || | || |||||||| || |||||||| |||
Sbjct 88128 GCCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 88187
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| ||||| |||||||| || ||| |||| | ||||||||||||||||||
Sbjct 88188 GAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 88247
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || || || ||| || ||||| | || | ||||| | ||||||||
Sbjct 88248 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGAC 88307
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||||| ||| || || || | || || ||||| || |||||
Sbjct 88308 TTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 88355
Score = 132 bits (146), Expect = 5e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||||| ||| | || |||||||| ||||||||||| ||| |
Sbjct 88641 CCACCACGCAGGCGGAGCACTAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 88700
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || ||| |||| | |||||||||||||||||||
Sbjct 88701 AGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 88760
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | |||||| | |||||| |
Sbjct 88761 ATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCCGAGGACTCCACC 88820
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|||| ||| | ||| || || ||
Sbjct 88821 TCGAGGGTGATGGTCTTGCCAGT 88843
Score = 131 bits (144), Expect = 2e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| |||||| || || || | || || || || ||||||||||| |||
Sbjct 88357 CCACCACGCAGACGCAGGACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCGGAA 88416
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| |||||||| || ||| |||| | ||||||||||||||||||
Sbjct 88417 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGA 88476
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||||||
Sbjct 88477 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCGACT 88536
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|||| ||||| ||| || ||||| || || || ||
Sbjct 88537 TCGAGGGTAATGGTCTTTCCGGTAAGGGTCTTGAC 88571
>seq209
Length=70751
Score = 129 bits (142), Expect = 6e-25
Identities = 356/539 (66%), Gaps = 15/539 (3%)
Strand=Plus/Minus
Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAG 46122
||| | ||||| |||| ||| || ||| | ||| || |||||||||| |||||
Sbjct 41660 CTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAG 41601
Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182
||||||| | || |||| || ||| |||| | || |||||||| ||| |||
Sbjct 41600 TGGATCACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAG 41541
Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT-TTACATCAAAACCAAGGGCATCAT 46241
||| ||||||| || ||| || ||| ||||||| | | | || | || | ||||
Sbjct 41540 GGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTC-TCAT 41482
Query 46242 GCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTT 46301
||| || ||||| || |||||||| || || || || ||||||||||| || |||||
Sbjct 41481 GCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTT 41422
Query 46302 TGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCC-----CGACACCGTG 46356
||| || || || | ||||| | | |||| | || || ||| |||
Sbjct 41421 TGCTTG--CCTGCTGT---TCTCGCAT-CTGAACAACC--GCCCCAGCAAGGACCTTGTG 41370
Query 46357 CTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC 46416
| | || ||| || || || | || ||||||||||| | || | || ||||||
Sbjct 41369 CAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTGCCC 41310
Query 46417 GCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGAC 46476
| ||||| || |||||||| | ||| | ||||| |||||||| || |||
Sbjct 41309 TGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGAC 41250
Query 46477 CGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTT 46536
|| ||||| || || | | |||| | | || || || || || ||
Sbjct 41249 CGCCTGCTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGACTTC 41190
Query 46537 ATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
||| | |||||||| || | ||||| ||||| || ||||| ||||| |||||||| ||
Sbjct 41189 ATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTCGAGAAGCGTGTCGGCGACTA 41131
>seq598
Length=260485
Score = 125 bits (138), Expect = 7e-24
Identities = 699/1111 (63%), Gaps = 11/1111 (1%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||| || | || || ||| || | ||| || ||| |||||
Sbjct 23917 TTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGT 23858
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || |||| || |||||||| || || | || | || || |||||| || ||
Sbjct 23857 TCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACT 23798
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | |||||||| | || |||| ||| || | |||||||| | | ||| |||||
Sbjct 23797 AGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCAC 23738
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297
|| | | || |||| |||||||| || ||||||| ||||| | | | | ||
Sbjct 23737 AGGTCACTAGGAGTCACATCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGAGAA 23678
Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357
|| | | | | |||| | ||| || | ||||| || || || |||
Sbjct 23677 CCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCG 23618
Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417
|| || || || || ||| ||| |||||||| | |||||| | || |
Sbjct 23617 GCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAA 23558
Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477
|||||||| || | ||||| || || || ||||||| || || || ||||| ||
Sbjct 23557 GGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGG 23498
Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537
|| ||||||||| | || || || ||| || |||| ||||| ||
Sbjct 23497 TGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGG 23438
Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCC 145597
|| | ||| || || || || | || | | | | ||||| ||||||| || | ||
Sbjct 23437 TTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCC 23378
Query 145598 TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCC 145657
| || | |||| || | | ||| | || || | || || || || |||
Sbjct 23377 TTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCA 23318
Query 145658 TCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717
|| | | | | ||| | | ||||| | ||||| || || ||||| || |||
Sbjct 23317 TCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGA 23258
Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777
|||| |||||| || || | |||||| ||| ||||||||||| | || |||||||
Sbjct 23257 TTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTC 23198
Query 145778 TCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGC-TGCTGGTA 145836
|| ||| | ||||| || | || | ||| || || | ||| |
Sbjct 23197 TCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTGACAACCATGC-GACC 23139
Query 145837 GCGGCCCTCTTCTTCGTA--TTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCG 145894
||| ||||| | ||||| |||| | |||| |||||||| | || ||||||||
Sbjct 23138 GCGACCCTCCTTCTCGTACTTTTCATACAGAG--CCTCAAACTCTTCGCCATAGCAATCC 23081
Query 145895 GACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGC 145954
| || |||||| || | ||||| ||||| || | ||| | | || | || |||
Sbjct 23080 GCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGC 23021
Query 145955 TCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCA 146014
| ||| ||||| || | |||||| || | | | ||| || || | || ||
Sbjct 23020 TTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCC 22961
Query 146015 GCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTTCAAT 146073
|| ||| | || | | | | || | | ||| || || ||||| || || |
Sbjct 22960 TTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGA-AGACATCAGCATGCCATGGCTCGAG 22902
Query 146074 ATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCATGTT 146130
||| | ||| | |||||| ||| ||| ||||||||||| || | ||| | ||||
Sbjct 22901 ATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTT 22842
Query 146131 GTTAAAGACGCGCACCATGGGCTCGACGCCG 146161
||| || || || | |||||| ||| ||||
Sbjct 22841 GTTGAAAACACGTAGCATGGGAACGATGCCG 22811
>seq330
Length=314808
Score = 116 bits (128), Expect = 3e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||||| || |||||||| ||| |
Sbjct 237243 CCACCACGCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 237184
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || || |||| || |||||||||||||| ||
Sbjct 237183 AGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGA 237124
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | |||||||
Sbjct 237123 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 237064
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226
|| | ||||| ||| ||||| || || || || ||||||
Sbjct 237063 TCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 237025
>seq753
Length=27693
Score = 113 bits (124), Expect = 4e-20
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| || || ||| || ||||| ||||||||||| ||| |||
Sbjct 10741 CCTTCTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 10800
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | |||||||||||||| || || || || ||||| || || ||||| | |
Sbjct 10801 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 10860
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | ||| || | |||||| | |||| ||||| || ||||| || || || || ||||
Sbjct 10861 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 10920
Query 131225 AAATCTGCAT 131234
||||||||||
Sbjct 10921 AAATCTGCAT 10930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472007141746560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |