Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq209 165 9e-36
>seq209
Length=70751
Score = 165 bits (182), Expect = 9e-36
Identities = 477/726 (66%), Gaps = 11/726 (2%)
Strand=Plus/Plus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
||||| ||||| || |||||||| ||||| |||| ||||||||||| ||||
Sbjct 41251 TCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGACCGCAG 41310
Query 92987 GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATT 93046
|| ||||| ||||||| ||| || |||||||| || ||||| || | | ||| || ||
Sbjct 41311 GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGAT--CTTTT 41368
Query 93047 ACTCTAC-TATTTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103
| | | | ||| ||| |||| | | || | ||| | ||| |||||||||
Sbjct 41369 GCACAAGGTCCTTGCTGGGGCGGTTGTTC-AGATGCGAGAACAGCAGGCAAGCAAAGTCG 41427
Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163
|| || | || || || || || || | ||| || ||| || | ||| || | ||
Sbjct 41428 GTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCATGAGA 41487
Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223
|| || || ||||| || || || || || || || ||||| || || || ||
Sbjct 41488 CCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTCGACA 41547
Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAA 93283
|| ||||| || || | || | |||||| | | || | ||||||| || | |
Sbjct 41548 GCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGATCCACTTCAGA 41607
Query 93284 GCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCT 93343
||||| ||||| || || || || | || || || || || || |||||
Sbjct 41608 GCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGTATGTG 41667
Query 93344 CGCT-CGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGAC 93402
|| | || | || | ||||| || || || | ||| || || ||||||| ||||
Sbjct 41668 CGTTGCGAGGGCTCCTTG-ATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGAGTGGAT 41726
Query 93403 ATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
|| ||||| || ||||| || ||||| || | || || | ||||||||| ||
Sbjct 41727 GTTTTCCATCATGATCTGGAAACCATAGAAGCAGCGGGCCTCGGGGATCTGCACCTCGCC 41786
Query 93463 AGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAA 93522
|| || | ||| ||||||||||| ||||| || ||||| || || ||||| || || |
Sbjct 41787 TGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGAAGGCAAG 41846
Query 93523 TATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATC 93579
|| || || || | | ||| || | || | | || | ||| ||| |||||
Sbjct 41847 AATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGTGGAGATC 41906
Query 93580 TTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATC 93639
|| || ||||| | || || ||||||| || || || || || || |||||||| |
Sbjct 41907 CTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTG 41966
Query 93640 CCATAT 93645
||| ||
Sbjct 41967 CCAGAT 41972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556854124631160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |