Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq209 116 8e-21
seq382 93.3 9e-14
>seq209
Length=70751
Score = 116 bits (128), Expect = 8e-21
Identities = 175/249 (70%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | | ||| ||||| ||| | ||| ||| | || ||| |
Sbjct 41363 ATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTGCCCTGCGGT 41304
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | || |||||| |||| || ||| |||||||| || || || || |||||| |
Sbjct 41303 CTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGACCGCCTG 41244
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | || || || | ||||| |||||| ||| |||||||| | ||| ||||||
Sbjct 41243 CTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGACTTCATGGAG 41184
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| ||||| || || |||||||||||||| ||||||||| | || || ||
Sbjct 41183 AACATCTCGCTCGGCGGCAAGACTAACTTCTTCGAGAAGCGTGTCGGCGACTACCAGAAG 41124
Query 243742 CCTGGTGTG 243750
||||||||
Sbjct 41123 GCTGGTGTG 41115
>seq382
Length=283822
Score = 93.3 bits (102), Expect = 9e-14
Identities = 245/362 (68%), Gaps = 24/362 (7%)
Strand=Plus/Plus
Query 333641 ACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTA 333700
|||||| ||||| |||||||||||||| | || | ||| | | ||| ||||
Sbjct 86222 ACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGCACCAAGTTCGTA 86281
Query 333701 GTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 333757
||| ||| | | || ||| | |||||| || ||||||| ||| || || |||
Sbjct 86282 GTATGACTTGGCCGA---GGGGCACTTCTTGACAAACTCGGCCAGGTTACCACGGTAACG 86338
Query 333758 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGGAACC 333816
||| ||||| | | | ||||| |||| ||| | | || || || ||| ||||| |
Sbjct 86339 CTTAAGCTTGAAGC---GCTCGTAGTGGACAAT-GTGCTGGCAGACGTTGTCAAGGAAGC 86394
Query 333817 CGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTATTCA 333872
| |||||||| || || || | | ||| || | |||| ||| |||||| ||
Sbjct 86395 CAGAGTCGTGAGAGACGATAATG---GAA--GTGC--AAGGAGAGTTGCACAGGTAGTCC 86447
Query 333873 ATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932
||||||| | ||||| |||| ||||||||||| |||||||||||||| || |
Sbjct 86448 TCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGAAGCAGGATA 86507
Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCA-AGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991
| | | || | ||||| ||| ||||| || ||||| ||||| || || |||||
Sbjct 86508 TCAGGAGCCTCGAAAACGGCACG-GCACAGAGCCAGCTTCATCTTCCAACCACCAGAAAG 86566
Query 333992 AG 333993
||
Sbjct 86567 AG 86568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102866448706650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |