Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq54 84.2 3e-11
>seq54
Length=183442
Score = 84.2 bits (92), Expect = 3e-11
Identities = 186/275 (68%), Gaps = 8/275 (3%)
Strand=Plus/Minus
Query 172619 AGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAG 172678
|| ||||| || ||||| ||||| | |||| ||| | ||| ||||| || | |||||
Sbjct 109855 AGTCCCTTGATATGTGAGCCATCATGATCCTGATCAGCCATGATCATGAGATGGCCATAA 109796
Query 172679 CGAAG---CTCGGAAACATCTTGATACT-CCTTACCCTGTTGAAGACCCAAGATCTTCTT 172734
||||| || || | || | ||||| |||| || | || |||| | || |||
Sbjct 109795 CGAAGACTCTTGGTATCAGTAT-ATACTGCCTTG---TGCTTCAGGCCCATAAACTGCTT 109740
Query 172735 GAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTT 172794
|| || | || ||| ||||| |||| ||| ||| || ||||| ||||||||
Sbjct 109739 GATATTCTGGATCTCCTGGTTCTTGGTGATTTGGTCCAGCGATGCATCACGGACATTGAG 109680
Query 172795 ACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGC 172854
||| ||||||||||||||||||||| | | || | | | | | | | || ||
Sbjct 109679 CATCTTACCACGGAGAGGGAACACACCGATGCGGTCGGGGTCGAGAATCGCACGGCCTGC 109620
Query 172855 AACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCA 172889
||| || | |||| || || |||||||| ||||
Sbjct 109619 AACAGCCAAACTCTTGGCTGAGTCACCCTCAGTCA 109585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597346439223720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |