Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq54 84.2 3e-11 >seq54 Length=183442 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/275 (68%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 172619 AGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAG 172678 || ||||| || ||||| ||||| | |||| ||| | ||| ||||| || | ||||| Sbjct 109855 AGTCCCTTGATATGTGAGCCATCATGATCCTGATCAGCCATGATCATGAGATGGCCATAA 109796 Query 172679 CGAAG---CTCGGAAACATCTTGATACT-CCTTACCCTGTTGAAGACCCAAGATCTTCTT 172734 ||||| || || | || | ||||| |||| || | || |||| | || ||| Sbjct 109795 CGAAGACTCTTGGTATCAGTAT-ATACTGCCTTG---TGCTTCAGGCCCATAAACTGCTT 109740 Query 172735 GAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACATTTTT 172794 || || | || ||| ||||| |||| ||| ||| || ||||| |||||||| Sbjct 109739 GATATTCTGGATCTCCTGGTTCTTGGTGATTTGGTCCAGCGATGCATCACGGACATTGAG 109680 Query 172795 ACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGC 172854 ||| ||||||||||||||||||||| | | || | | | | | | | || || Sbjct 109679 CATCTTACCACGGAGAGGGAACACACCGATGCGGTCGGGGTCGAGAATCGCACGGCCTGC 109620 Query 172855 AACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCA 172889 ||| || | |||| || || |||||||| |||| Sbjct 109619 AACAGCCAAACTCTTGGCTGAGTCACCCTCAGTCA 109585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346439223720