Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq598 205 1e-47 seq209 105 8e-18 >seq598 Length=260485 Score = 205 bits (226), Expect = 1e-47 Identities = 1050/1650 (64%), Gaps = 51/1650 (3%) Strand=Plus/Plus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| |||||| |||| || ||||| || || ||||| || | || |||| Sbjct 22593 TTCACTCACGCATCACCTACGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCA 22652 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 |||||||| | | | ||||| || ||| | |||||||||| || |||| Sbjct 22653 TGTTTCCTAGTCGACATGAAGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 22712 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 |||||| || || ||| ||||||||||||||| | | | || | | | ||| Sbjct 22713 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCC 22772 Query 111885 AACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 111944 | ||| ||| || || || ||| || | || || |||| ||||| || Sbjct 22773 ACTGGCTCTTACATTGCTGGCACTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGT 22832 Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA----- 111999 || || ||| ||| || || ||||| |||| | ||| |||| || || Sbjct 22833 GTTTTCAACAACACCGCCCGTTATGTTGACCAGGGTGGAAA---CAAGCGACCTGGAGCC 22889 Query 112000 -TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 112058 | || | ||||| ||||||||||| || ||| || | |||||||| || || || Sbjct 22890 TTTGCCATTTATCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAG 22949 Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 ||||| || | || || | || ||| || || || |||| || || ||||| || Sbjct 22950 AACCACGGAAAGGAAGAAGTCCG-TGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 23008 Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGG 112176 | ||||||||| | |||||| ||| || | ||| ||||| | || || | || | Sbjct 23009 CTTGTTCATGAAGCGTGTTGAGAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 23068 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 | ||||| | | ||| | || || |||||||| || || || |||||||||| Sbjct 23069 C-CCCGGCTTGGCGGATTGCTATGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGA 23127 Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG--ATGTGTGGAAAGCTATTCTCAA 112294 | || |||| | | | || | || || || | ||||| | || ||||| | Sbjct 23128 AGGAGGGTCGCG-GTC-GCATGGTTGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGA 23185 Query 112295 GTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG 112354 | |||| || |||||||| | || | |||||| ||||||||| ||| |||| ||||| Sbjct 23186 GGCTCAGACTGAGACTGGCAACCCTTTTATGCTCTACAAAGACCACTGCAACCGCAAGAG 23245 Query 112355 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATT 112414 ||||| || ||| | ||| || ||||| ||||| || || || || | || | Sbjct 23246 CAATCAGAAAAATCTAGGTACCATTCGCAGTTCGAACCTGTGCACTGAGATTATCGAGTA 23305 Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 | | |||||| |||||||| ||||| ||||| | || || || | || Sbjct 23306 CTGTGCCCCTGATGAGGTCGCTGTGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGT 23365 Query 112475 GGATCCAGAGACAAAGACA--TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 112532 ||| | | | |||| | | ||| | | |||| || |||||||| || || ||| Sbjct 23366 GGA-CTACA-ACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTT 23423 Query 112533 ACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 112592 ||||||||| | | || ||| ||| ||||| || || |||| || Sbjct 23424 GTTCGCAACCTAAACCGCATCATCGATGTGAATCACTACCCTGTCCAGGAAGCTCACAAC 23483 Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652 || ||| | |||||||| |||||| ||||||| || || || || || | ||| || Sbjct 23484 AGCAACATGCGCCACCGTCCCATTGGTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTT 23543 Query 112653 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAG 112712 | ||| | ||||| ||| ||||| | |||| || || ||||| Sbjct 23544 GCTCTCCGCATGCCTTTTGAATCCCCTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAA 23603 Query 112713 ACAATGTATCACGCCGCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCA 112769 || || || |||||||| || || ||| ||| | || || || ||| | Sbjct 23604 ACCATCTACCACGCCGCACTAACTGC---TTCAATGGAAATCGCCCAGACGGAGGGTACT 23660 Query 112770 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 || ||| | |||||||||||| | || ||||| | | || |||||||||||||| Sbjct 23661 TACTCAACTTATGAGGGTTCTCCTGTCTCCCAAGGCATCTTGCAGTTTGATATGTGGGAT 23720 Query 112830 GGTGAGACCAAGCTTCAC---TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAG 112886 | ||| || || | || | |||||| |||| ||||| || ||| || | Sbjct 23721 G-TGACTCCTAG--TGACCTGTGGGACTGGACTTCTCTAAAGGAGAAGATTAAGCAGCAT 23777 Query 112887 GGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 ||| | || || |||| | | ||||| ||||| |||||| ||| | || || || Sbjct 23778 GGTGTACGCAATTCTCTTCTAGTTGCACCCATGCCTACAGCCAGCACGTCGCAGATTCTG 23837 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCG 113006 || || ||||| ||||| ||||||||||| | ||||| || | | | | || || Sbjct 23838 GGCAACAATGAGTGCTTCGAACCCTACACATCCAACATTTACCAGCGCCGCGTTCTTGCT 23897 Query 113007 GGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGG 113066 || ||||| | | |||||| ||| | |||||| || ||||| | ||| Sbjct 23898 GGCGAGTTCCAGGTCGTCAACCCCTGGCTCCTACGTGACCTAGTCGATCTTGGTTTATGG 23957 Query 113067 TCCAAGGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATAT-TGT 113122 || | |||||||| ||| || | | |||| ||| |||||||| || || | | Sbjct 23958 TCTGACAATATGAAGAATCGCA---TTATTGCGGACAATGGCTCCATTCAGAACATCTCT 24014 Query 113123 GGATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAAT---CAAGATGAA 113179 | ||||| | ||| ||||| ||||| || |||||||| || | || | Sbjct 24015 AG-CATTCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAGATTTCCCAGCGTAC 24073 Query 113180 GGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA 113239 | || | | ||||| || ||||||||| |||||||| ||| || ||| | | Sbjct 24074 AGTTG---TGCAAATGGCTGCTGATCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCTA 24128 Query 113240 TCTATT--CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGG 113297 ||| |||| || ||| || ||| |||| || | |||||| | | ||| Sbjct 24129 AACATTCACATGAAAGATCCCACCATGGGCAAGATCACCAGCATGCACTTTGCTGGCTGG 24188 Query 113298 AAGAAGGGTCTCAAAACGGGGATGTATTAC 113327 || |||||||| ||||| ||||| ||| Sbjct 24189 AAACTAGGTCTCAAGACGGGCATGTACTAC 24218 >seq209 Length=70751 Score = 105 bits (116), Expect = 8e-18 Identities = 346/525 (66%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||||||||| ||| | ||||| || |||||| | |||| ||||| | ||| || Sbjct 41936 TGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 41877 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 41876 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 41817 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || || ||| || | | ||| | | |||||||| |||| | || || | | Sbjct 41816 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 41758 Query 101993 TTTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||||| || || | |||| ||| ||| | || || || ||| || | Sbjct 41757 CTTCTATG-GTTTCCAGATCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 41699 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-TTGAA-GCCATCCAAAC 102109 | |||| || || ||||| | || || || || || || ||||| | || Sbjct 41698 TTGACACCTACATCAAGGA--GCCCTCGCAACGCACATACCTGTTCAATGCCATTGACAC 41641 Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 102166 |||| || || | || || || |||||| |||||||| | |||| |||| Sbjct 41640 TATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTC 41581 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| || Sbjct 41580 GA---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGG 41524 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 ||||| | | || | ||||| ||||| ||||||||||| ||||| |||||| Sbjct 41523 CGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTC 41464 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||| |||||||| ||||| || ||| || ||||| Sbjct 41463 AAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 41419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734958850480