Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq598 185 1e-41
seq710 120 4e-22
seq209 113 5e-20
>seq598
Length=260485
Score = 185 bits (204), Expect = 1e-41
Identities = 1100/1742 (63%), Gaps = 66/1742 (4%)
Strand=Plus/Minus
Query 109364 CTGGCTCTAAACTAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATAC 109423
|||| |||| | | |||||||| ||| ||| |||| || || | || ||||| |
Sbjct 24266 CTGG-TCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGCAAGTAGTACATGC 24208
Query 109424 CCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGAGAGTTTGGAAAGTGTC 109482
|||| |||||||| ||||| || || | ||||| | || ||| | ||
Sbjct 24207 CCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 24149
Query 109483 GGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCC 109542
||| | ||| | ||| | ||||| || || || ||||| ||||||||||||
Sbjct 24148 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 24089
Query 109543 GCCATGTCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTG 109599
||||| | | | ||| || || ||| ||||| || |||||||||| | ||
Sbjct 24088 GCCATTTGCACAACTGTACGCT---GGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTA 24032
Query 109600 ATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCC 109659
|||||| | |||||| |||||| ||||| |||||| || | ||| ||| |
Sbjct 24031 ATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTC 23972
Query 109660 TTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTG 109716
||||| | | ||||| | ||| | | || |||| || || | |||
Sbjct 23971 TTCATATTGTCAGACCATAAACCAAGATCGACTAG---GTCACGTAGGAGCCAGGGGTTG 23915
Query 109717 ACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCG 109776
|| || || || |||||||| ||| || |||| ||||| | ||||||||||||
Sbjct 23914 ACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCG 23855
Query 109777 AAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGA 109836
|| |||||||||||||| || || || | ||| ||||| |||||||| || | |||
Sbjct 23854 AAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGA 23795
Query 109837 AGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGA 109896
||| || || | ||| | | ||| | | ||| | | ||| || | |
Sbjct 23794 AGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGG 23735
Query 109897 CCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGA 109956
||||| |||| || ||||||||||| || | | || | | |||||
Sbjct 23734 TCACTAGG---AGTCACA---TCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGA 23681
Query 109957 GAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGT 110016
||||||| || | ||| | ||||| || ||| | || |||||| ||||
Sbjct 23680 GAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGT 23621
Query 110017 GCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG--- 110073
|| || || || || || |||||||| || || | |||| | ||||| |
Sbjct 23620 GCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG---CTTCAGGGGAT 23564
Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133
|| || || | | | || || | || || || ||||| ||||||| |||||||
Sbjct 23563 TCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATG 23504
Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGA 110191
|| || || |||||| | |||| || || || ||||| || ||||
Sbjct 23503 GGACGGTGGCGCATGTTGCTGTTGTGAGC--TTCCTGGACAGGGTAGTGATTCACATCGA 23446
Query 110192 TGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT------GTCGT 110245
||| || || || || ||| | |||| ||| || || || ||| |
Sbjct 23445 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 23386
Query 110246 AATCGAACGTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTG 110304
| || | | || | || ||| || | || || || | ||| || || |||
Sbjct 23385 ACTC-ACCCTTGTTGTAGTCC------ACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTG 23333
Query 110305 CACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTC 110364
||||||| ||| || | | ||| || | ||| || || |||| ||| |||||
Sbjct 23332 CACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTG 23273
Query 110365 TTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATG 110424
|||| ||| | || |||||||| ||| |||||| || || ||||||||
Sbjct 23272 CGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATA 23213
Query 110425 TATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGG 110484
| ||| | ||||| || ||||| | || |||||||| | ||| | | ||| |
Sbjct 23212 AAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG 23153
Query 110485 ACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCT 110542
||| |||| | || |||| |||| ||||||||| |||| ||||||| || |
Sbjct 23152 ACAACCATGCG--ACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTT 23095
Query 110543 GTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCA 110601
|| || ||| | | | || || || | ||| || | ||| | ||| | ||
Sbjct 23094 CGCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCA 23036
Query 110602 CCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGG 110661
|| |||||| | ||||||||||| ||| ||||||| ||| |||| ||||||||
Sbjct 23035 TTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGA 22976
Query 110662 CAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAG 110721
||| | ||||| | || ||||| ||||| || | || || | || ||| |
Sbjct 22975 GCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCA 22916
Query 110722 TGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTA 110775
|||||||| |||||||| | || | || ||| | | || || |||||| |
Sbjct 22915 TGCCATGGCTCGAGATAAATGGCAAAGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCA 22859
Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835
||||| || || ||| ||||| || | ||||| |||| || || | || |||
Sbjct 22858 ACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCG 22799
Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895
|| || || ||| || | |||||||||| ||| | || | ||| ||||||
Sbjct 22798 TTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCA 22739
Query 110896 CCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGA 110954
|| ||| ||| ||| |||| | ||| |||| ||| | ||||| || || ||
Sbjct 22738 CCAGCCATCTTGGAAATCATGGCACAAGTCT-TGAGGGTATCGTAAATGCCCTCGATGCT 22680
Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014
|| |||| || | | ||| || || ||||||| ||||| | || || || |||||
Sbjct 22679 GTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATT 22620
Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCG 111072
||||| ||||||| || ||| ||| ||| |||| ||||| |||||| || ||
Sbjct 22619 AAAGAGCGTAGGTGATGCGTGAGTGA--AGAACTTGCTAGACATAAGGTTGTAGGTTTCA 22562
Query 111073 AG 111074
||
Sbjct 22561 AG 22560
>seq710
Length=50993
Score = 120 bits (132), Expect = 4e-22
Identities = 337/507 (66%), Gaps = 28/507 (6%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|||||||||||||| || | | || || | ||| || | ||| | ||||| || ||
Sbjct 35315 CGATCGAAACGACCGGGTCTCATCAGCGCCTTATCCAGGACATCAGCGCGGTTGGTGCCG 35374
Query 11563 GCAATGACTACAAT--GCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620
|| | ||| || || || | | ||| ||| || |||||||| || || | |||||
Sbjct 35375 GCCAGGACAACGATTTGCTCGGCGG--TGTTGAAGCCATCCATTTCAGTCAGGATCTGGT 35432
Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGC----CGAA-CGCTTCTT 11675
||| ||| || |||||||||||| | | ||| ||| ||| |||||||
Sbjct 35433 TGAGCGTGGACTCGCGCTCATCGTTGCCA--CCTCCCA--TGCGGTTCGAGTCGCTTCTG 35488
Query 11676 A-----CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730
|| | ||| |||||||| || || || | ||| || || ||| || |||
Sbjct 35489 GAGCGGCCAATAGCATCAATCTCGTCAATAAAAATGATGCATGGCGCGTTCTTGCGCGCC 35548
Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790
| ||||| ||||| |||||| || || || || || |||||||| || || |
Sbjct 35549 GTAGCAAAAAGATCACGCACACGCGACGGACCCACGCCGACAAACATCTCGACAAACTCG 35608
Query 11791 GCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848
| | || || | ||||| ||| ||||| ||||| ||||| |||| || || |
Sbjct 35609 GAGCCGCTGA-CGCTGAA-GAACGGAACGCCTGACTCGCCAGCCGTGGCCTTGGCTAGCA 35666
Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-- 11906
| ||||| ||||| || || | || | || | |||||||| ||||||||||||||
Sbjct 35667 GCGTCTTGCCCGTTCCCGGAGGGCCCGATAGGATAGCGCCACGCGGGATCTTGGCACCCA 35726
Query 11907 -ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965
|| |||| | || |||||||||||||| | ||||| |||| | || |||
Sbjct 35727 GACGCACAAACT---TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATCTCGACCT 35783
Query 11966 TGGCGGAGTCGATACCCTCAACATCGG 11992
|||| ||| || || | |||||||
Sbjct 35784 TGGCCTCGTCCATTCCGGCCACATCGG 35810
>seq209
Length=70751
Score = 113 bits (124), Expect = 5e-20
Identities = 526/818 (64%), Gaps = 28/818 (3%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
||||| || || | ||| |||||||| || ||||| || |||| |||||||| |||||
Sbjct 41131 TAGTCGCCGACACGCTTCTCGAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTCCATG 41190
Query 119268 AAGTCAAAAGGATTTTTGGA--GTTCCAGATTG--GTGG--TTGACCAACTTGTTTCAGA 119321
||||| || || ||| ||| | | || || || | | || |||| ||
Sbjct 41191 AAGTCGAAGGGGTTTGTGGCACGGTACACCTTCTCGTTGCCTAGAGCAACA------AGC 41244
Query 119322 AGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGA 119381
|| || || | ||| |||| || || | |||| || | ||||| |||| |||
Sbjct 41245 AGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGA 41304
Query 119382 TTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATG 119441
|| || ||||| ||| | ||| | |||||||||| | || || || | | |||
Sbjct 41305 CCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGATC 41364
Query 119442 GAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTA-AACAACTCTACGGCAAA 119500
|| | | || | | ||| | || | ||| | |||| | |||||
Sbjct 41365 TTTTGCACAAGGTCCTT-GCTGGGGCGGTTGTTCAGATGCGAGAACAGCAGGCAAGCAAA 41423
Query 119501 TTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCAT 119560
|| || || || ||||| ||||| || ||||| || |||| || ||||||||
Sbjct 41424 GTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCAT 41483
Query 119561 GAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTC 119620
||| || | || ||||| ||||||| || || || || |||||||||||
Sbjct 41484 GAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTC 41543
Query 119621 CACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACT 119676
||| || || || | ||| |||| || ||| ||||| |||||| || |||||
Sbjct 41544 GACAGCAGCAAAGGCAACTAGGCGCTGGGC-AAACGTCGACTCCTTGTCGGTGATCCACT 41602
Query 119677 TGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGT 119735
| |||||||||| |||||| || |||||||| | ||| | ||||| | ||| | ||
Sbjct 41603 TCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGT 41662
Query 119736 TGCTTCTTTTC-AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACC 119794
| | || | || | ||||| || || | ||||| || |||||||| |||
Sbjct 41663 ATGTGCGTTGCGAGGGC--TCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGA 41720
Query 119795 ATGAACCATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCA 119853
|| | ||| ||| || ||| | |||| || |||| || |||| || ||||
Sbjct 41721 GTGGATGTTTTCCATCATG-ATCTGGAAACCATAGAAGCAGCGGGCCTCGGGGATCTGCA 41779
Query 119854 CTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGA 119913
| ||| | | || | || |||||| || || ||||| || |||| ||||
Sbjct 41780 CCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGA 41839
Query 119914 ATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTT--GAGTGTT-TTCCAGTCGT 119970
| || | |||| ||||| | ||| || | | ||| || ||| ||||||||||
Sbjct 41840 AGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGT 41899
Query 119971 CCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008
| ||| ||||||| || | ||| ||||| ||||||
Sbjct 41900 GGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAG 41937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588968939650200
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