Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq598 185 1e-41 seq710 120 4e-22 seq209 113 5e-20 >seq598 Length=260485 Score = 185 bits (204), Expect = 1e-41 Identities = 1100/1742 (63%), Gaps = 66/1742 (4%) Strand=Plus/Minus Query 109364 CTGGCTCTAAACTAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATAC 109423 |||| |||| | | |||||||| ||| ||| |||| || || | || ||||| | Sbjct 24266 CTGG-TCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGCAAGTAGTACATGC 24208 Query 109424 CCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGAGAGTTTGGAAAGTGTC 109482 |||| |||||||| ||||| || || | ||||| | || ||| | || Sbjct 24207 CCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 24149 Query 109483 GGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCC 109542 ||| | ||| | ||| | ||||| || || || ||||| |||||||||||| Sbjct 24148 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 24089 Query 109543 GCCATGTCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTG 109599 ||||| | | | ||| || || ||| ||||| || |||||||||| | || Sbjct 24088 GCCATTTGCACAACTGTACGCT---GGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTA 24032 Query 109600 ATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCC 109659 |||||| | |||||| |||||| ||||| |||||| || | ||| ||| | Sbjct 24031 ATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTC 23972 Query 109660 TTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTG 109716 ||||| | | ||||| | ||| | | || |||| || || | ||| Sbjct 23971 TTCATATTGTCAGACCATAAACCAAGATCGACTAG---GTCACGTAGGAGCCAGGGGTTG 23915 Query 109717 ACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCG 109776 || || || || |||||||| ||| || |||| ||||| | |||||||||||| Sbjct 23914 ACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCG 23855 Query 109777 AAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGA 109836 || |||||||||||||| || || || | ||| ||||| |||||||| || | ||| Sbjct 23854 AAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGA 23795 Query 109837 AGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGA 109896 ||| || || | ||| | | ||| | | ||| | | ||| || | | Sbjct 23794 AGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGG 23735 Query 109897 CCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGA 109956 ||||| |||| || ||||||||||| || | | || | | ||||| Sbjct 23734 TCACTAGG---AGTCACA---TCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGA 23681 Query 109957 GAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGT 110016 ||||||| || | ||| | ||||| || ||| | || |||||| |||| Sbjct 23680 GAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGT 23621 Query 110017 GCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG--- 110073 || || || || || || |||||||| || || | |||| | ||||| | Sbjct 23620 GCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG---CTTCAGGGGAT 23564 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 || || || | | | || || | || || || ||||| ||||||| ||||||| Sbjct 23563 TCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATG 23504 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGA 110191 || || || |||||| | |||| || || || ||||| || |||| Sbjct 23503 GGACGGTGGCGCATGTTGCTGTTGTGAGC--TTCCTGGACAGGGTAGTGATTCACATCGA 23446 Query 110192 TGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT------GTCGT 110245 ||| || || || || ||| | |||| ||| || || || ||| | Sbjct 23445 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 23386 Query 110246 AATCGAACGTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTG 110304 | || | | || | || ||| || | || || || | ||| || || ||| Sbjct 23385 ACTC-ACCCTTGTTGTAGTCC------ACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTG 23333 Query 110305 CACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTC 110364 ||||||| ||| || | | ||| || | ||| || || |||| ||| ||||| Sbjct 23332 CACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTG 23273 Query 110365 TTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATG 110424 |||| ||| | || |||||||| ||| |||||| || || |||||||| Sbjct 23272 CGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATA 23213 Query 110425 TATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGG 110484 | ||| | ||||| || ||||| | || |||||||| | ||| | | ||| | Sbjct 23212 AAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG 23153 Query 110485 ACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCT 110542 ||| |||| | || |||| |||| ||||||||| |||| ||||||| || | Sbjct 23152 ACAACCATGCG--ACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTT 23095 Query 110543 GTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCA 110601 || || ||| | | | || || || | ||| || | ||| | ||| | || Sbjct 23094 CGCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCA 23036 Query 110602 CCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGG 110661 || |||||| | ||||||||||| ||| ||||||| ||| |||| |||||||| Sbjct 23035 TTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGA 22976 Query 110662 CAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAG 110721 ||| | ||||| | || ||||| ||||| || | || || | || ||| | Sbjct 22975 GCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCA 22916 Query 110722 TGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTA 110775 |||||||| |||||||| | || | || ||| | | || || |||||| | Sbjct 22915 TGCCATGGCTCGAGATAAATGGCAAAGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCA 22859 Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835 ||||| || || ||| ||||| || | ||||| |||| || || | || ||| Sbjct 22858 ACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCG 22799 Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895 || || || ||| || | |||||||||| ||| | || | ||| |||||| Sbjct 22798 TTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCA 22739 Query 110896 CCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGA 110954 || ||| ||| ||| |||| | ||| |||| ||| | ||||| || || || Sbjct 22738 CCAGCCATCTTGGAAATCATGGCACAAGTCT-TGAGGGTATCGTAAATGCCCTCGATGCT 22680 Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014 || |||| || | | ||| || || ||||||| ||||| | || || || ||||| Sbjct 22679 GTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATT 22620 Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCG 111072 ||||| ||||||| || ||| ||| ||| |||| ||||| |||||| || || Sbjct 22619 AAAGAGCGTAGGTGATGCGTGAGTGA--AGAACTTGCTAGACATAAGGTTGTAGGTTTCA 22562 Query 111073 AG 111074 || Sbjct 22561 AG 22560 >seq710 Length=50993 Score = 120 bits (132), Expect = 4e-22 Identities = 337/507 (66%), Gaps = 28/507 (6%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||||||||| || | | || || | ||| || | ||| | ||||| || || Sbjct 35315 CGATCGAAACGACCGGGTCTCATCAGCGCCTTATCCAGGACATCAGCGCGGTTGGTGCCG 35374 Query 11563 GCAATGACTACAAT--GCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | ||| || || || | | ||| ||| || |||||||| || || | ||||| Sbjct 35375 GCCAGGACAACGATTTGCTCGGCGG--TGTTGAAGCCATCCATTTCAGTCAGGATCTGGT 35432 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGC----CGAA-CGCTTCTT 11675 ||| ||| || |||||||||||| | | ||| ||| ||| ||||||| Sbjct 35433 TGAGCGTGGACTCGCGCTCATCGTTGCCA--CCTCCCA--TGCGGTTCGAGTCGCTTCTG 35488 Query 11676 A-----CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 || | ||| |||||||| || || || | ||| || || ||| || ||| Sbjct 35489 GAGCGGCCAATAGCATCAATCTCGTCAATAAAAATGATGCATGGCGCGTTCTTGCGCGCC 35548 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | ||||| ||||| |||||| || || || || || |||||||| || || | Sbjct 35549 GTAGCAAAAAGATCACGCACACGCGACGGACCCACGCCGACAAACATCTCGACAAACTCG 35608 Query 11791 GCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848 | | || || | ||||| ||| ||||| ||||| ||||| |||| || || | Sbjct 35609 GAGCCGCTGA-CGCTGAA-GAACGGAACGCCTGACTCGCCAGCCGTGGCCTTGGCTAGCA 35666 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-- 11906 | ||||| ||||| || || | || | || | |||||||| |||||||||||||| Sbjct 35667 GCGTCTTGCCCGTTCCCGGAGGGCCCGATAGGATAGCGCCACGCGGGATCTTGGCACCCA 35726 Query 11907 -ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965 || |||| | || |||||||||||||| | ||||| |||| | || ||| Sbjct 35727 GACGCACAAACT---TTTCGGGCTTCTTGAGGAACTGCACAAACTCCATGATCTCGACCT 35783 Query 11966 TGGCGGAGTCGATACCCTCAACATCGG 11992 |||| ||| || || | ||||||| Sbjct 35784 TGGCCTCGTCCATTCCGGCCACATCGG 35810 >seq209 Length=70751 Score = 113 bits (124), Expect = 5e-20 Identities = 526/818 (64%), Gaps = 28/818 (3%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 ||||| || || | ||| |||||||| || ||||| || |||| |||||||| ||||| Sbjct 41131 TAGTCGCCGACACGCTTCTCGAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTCCATG 41190 Query 119268 AAGTCAAAAGGATTTTTGGA--GTTCCAGATTG--GTGG--TTGACCAACTTGTTTCAGA 119321 ||||| || || ||| ||| | | || || || | | || |||| || Sbjct 41191 AAGTCGAAGGGGTTTGTGGCACGGTACACCTTCTCGTTGCCTAGAGCAACA------AGC 41244 Query 119322 AGACGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGA 119381 || || || | ||| |||| || || | |||| || | ||||| |||| ||| Sbjct 41245 AGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGA 41304 Query 119382 TTACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATG 119441 || || ||||| ||| | ||| | |||||||||| | || || || | | ||| Sbjct 41305 CCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGATC 41364 Query 119442 GAGTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTA-AACAACTCTACGGCAAA 119500 || | | || | | ||| | || | ||| | |||| | ||||| Sbjct 41365 TTTTGCACAAGGTCCTT-GCTGGGGCGGTTGTTCAGATGCGAGAACAGCAGGCAAGCAAA 41423 Query 119501 TTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCAT 119560 || || || || ||||| ||||| || ||||| || |||| || |||||||| Sbjct 41424 GTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCAT 41483 Query 119561 GAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTC 119620 ||| || | || ||||| ||||||| || || || || ||||||||||| Sbjct 41484 GAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTC 41543 Query 119621 CACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACT 119676 ||| || || || | ||| |||| || ||| ||||| |||||| || ||||| Sbjct 41544 GACAGCAGCAAAGGCAACTAGGCGCTGGGC-AAACGTCGACTCCTTGTCGGTGATCCACT 41602 Query 119677 TGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGT 119735 | |||||||||| |||||| || |||||||| | ||| | ||||| | ||| | || Sbjct 41603 TCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGT 41662 Query 119736 TGCTTCTTTTC-AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACC 119794 | | || | || | ||||| || || | ||||| || |||||||| ||| Sbjct 41663 ATGTGCGTTGCGAGGGC--TCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGA 41720 Query 119795 ATGAACCATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCA 119853 || | ||| ||| || ||| | |||| || |||| || |||| || |||| Sbjct 41721 GTGGATGTTTTCCATCATG-ATCTGGAAACCATAGAAGCAGCGGGCCTCGGGGATCTGCA 41779 Query 119854 CTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGA 119913 | ||| | | || | || |||||| || || ||||| || |||| |||| Sbjct 41780 CCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGA 41839 Query 119914 ATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTT--GAGTGTT-TTCCAGTCGT 119970 | || | |||| ||||| | ||| || | | ||| || ||| |||||||||| Sbjct 41840 AGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGT 41899 Query 119971 CCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 | ||| ||||||| || | ||| ||||| |||||| Sbjct 41900 GGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAG 41937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968939650200