Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq598 154 2e-32 seq209 111 2e-19 >seq598 Length=260485 Score = 154 bits (170), Expect = 2e-32 Identities = 1029/1637 (63%), Gaps = 27/1637 (2%) Strand=Plus/Minus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTT 105654 |||||||| || |||||||| ||| ||||||| || || | ||||| | || ||| Sbjct 24217 TAGTACATGCCCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTT 24159 Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714 | ||| || ||| || |||| || || | | || ||||||||||| ||| Sbjct 24158 GCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACC 24099 Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTGCGGTA 105771 ||| | || ||||| | | || | | || | || ||||| || || ||| Sbjct 24098 ACGATCAGCAGCCATTTGCA---CAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTA 24042 Query 105772 GAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGAC 105831 ||| || |||||| | || || ||||| || ||||| || || || | Sbjct 24041 CAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAAT 23982 Query 105832 CATGAGATCCTTCATATCCTTGGACCAAAGACCAA--TCTTCTTGAGATCATTGACGAGA 105889 ||| ||| |||||||| | ||||| | ||||| || || || ||| | ||| Sbjct 23981 AATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACT--AGGTCACGTAGGAGC 23924 Query 105890 TGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTG 105949 |||||| | | ||||| || || || | | | | || ||||| | ||| Sbjct 23923 CAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTG 23864 Query 105950 TAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 106009 |||||||| ||||| ||||| || |||| || || | ||| |||||| ||||| ||| Sbjct 23863 TAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGT 23804 Query 106010 GCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAG 106069 || | | |||| || || | ||| | | ||| || ||||| ||| | |||| Sbjct 23803 GCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAG 23744 Query 106070 TCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127 || | | | | || || |||| | ||||||||||||| || | | |||||||| Sbjct 23743 TCCCACAGGTCA-CTAGGAGTCACAT-CCCACATATCAAACTGCAAGATGCCTTGGGAGA 23686 Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187 |||||||||||| | || || | ||| | | | || | ||| || Sbjct 23685 CAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAG 23626 Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 || | ||||| || ||||||||||| || | || | || |||||| | Sbjct 23625 TTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGG 23566 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 | ||||| | |||| || || | || || || || || ||||| | ||||| Sbjct 23565 ATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAA 23506 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | || | ||| ||||| || || | || || || || || ||| || | Sbjct 23505 TGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGA 23446 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 ||| |||||||| || ||||| | |||| ||| || || |||| | | ||| Sbjct 23445 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 23386 Query 106428 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 106487 | | | | | | || | |||||||| | ||||| | ||||| |||| Sbjct 23385 ACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAG 23326 Query 106488 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCG 106547 | |||||| | |||||| | ||| || || |||| ||| ||||| ||| | Sbjct 23325 CGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGG 23266 Query 106548 TCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 106607 | || | ||| || || || ||||| |||||| || ||||||||||| | || Sbjct 23265 TACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGT 23206 Query 106608 TCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATG 106666 | || ||||| ||||| | || ||||| || | ||||| || | | || | |||| Sbjct 23205 TGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG-ACAACC 23147 Query 106667 GCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 106726 | | || |||||| |||||||||| || || || |||||||| || ||| Sbjct 23146 ATGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTC-GCCATA 23088 Query 106727 GC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCTCCT 106784 || || | | | | || || || | || || | |||| ||| | || || || Sbjct 23087 GCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCT 23029 Query 106785 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGA 106843 |||| ||||||||||| | ||| |||||||||| | || || || | | ||| || Sbjct 23028 CAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGA 22969 Query 106844 GCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCAT 106903 | ||||| | || ||||| ||||| || |||||||| | || ||| || |||||| Sbjct 22968 -CTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCCAT 22910 Query 106904 GGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGC 106960 ||||| ||||| | || | | ||| ||| ||| | || | ||||| || Sbjct 22909 GGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGG 22850 Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020 || ||| ||| || || || ||||| |||| || || | || ||| || || || Sbjct 22849 GCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCGTTAGTGCCA 22790 Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080 ||| ||| | |||| | | | || | | | || ||||| |||||| | Sbjct 22789 GCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCACCAGCCATC 22730 Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140 || || || ||||| | | || || | || || || | ||| ||| ||||| Sbjct 22729 TTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTC 22670 Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200 || ||| ||||| || |||| ||| | || ||||| ||||| ||||| || Sbjct 22669 ATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTA 22610 Query 107201 GGTGTTGCGTGAATGAA 107217 |||| ||||||| |||| Sbjct 22609 GGTGATGCGTGAGTGAA 22593 >seq209 Length=70751 Score = 111 bits (122), Expect = 2e-19 Identities = 340/520 (65%), Gaps = 7/520 (1%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || |||||||| || |||||||| || ||||||||| || || Sbjct 41419 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 41478 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| ||||| || ||| | || | | ||| | || ||||| ||||| Sbjct 41479 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 41538 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAA 117452 ||||| ||| ||||| |||| ||||||| ||| || | ||| | |||| | | Sbjct 41539 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 41597 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 ||| |||| ||||| | ||||| || || || | ||| | ||||| | || Sbjct 41598 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 41657 Query 117513 TAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 117572 | | | || || ||||| ||||| ||||||||| || || ||||| Sbjct 41658 CAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 41717 Query 117573 GCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCT 117631 || | ||| ||| ||| | || | | ||||| |||| || ||| |||| Sbjct 41718 AGAGTGGATGTTTTCCATCATGATCTGGA-AACCATAGAAGCAGCGGGCCTCGGGGATCT 41776 Query 117632 GCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 117691 |||| || | | || | | || ||| || || || ||||| || |||||| Sbjct 41777 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 41836 Query 117692 AGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGT 117748 |||| || || |||| ||||| | || || | || |||| || | ||||||| Sbjct 41837 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 41896 Query 117749 CGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||| ||||| || |||| ||||| || || |||||||| Sbjct 41897 CGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 41936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973727605160