Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq598 154 2e-32
seq209 111 2e-19
>seq598
Length=260485
Score = 154 bits (170), Expect = 2e-32
Identities = 1029/1637 (63%), Gaps = 27/1637 (2%)
Strand=Plus/Minus
Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTT 105654
|||||||| || |||||||| ||| ||||||| || || | ||||| | || |||
Sbjct 24217 TAGTACATGCCCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTT 24159
Query 105655 GGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACC 105714
| ||| || ||| || |||| || || | | || ||||||||||| |||
Sbjct 24158 GCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACC 24099
Query 105715 ACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACTGTGCGGTA 105771
||| | || ||||| | | || | | || | || ||||| || || |||
Sbjct 24098 ACGATCAGCAGCCATTTGCA---CAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTA 24042
Query 105772 GAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGAC 105831
||| || |||||| | || || ||||| || ||||| || || || |
Sbjct 24041 CAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAAT 23982
Query 105832 CATGAGATCCTTCATATCCTTGGACCAAAGACCAA--TCTTCTTGAGATCATTGACGAGA 105889
||| ||| |||||||| | ||||| | ||||| || || || ||| | |||
Sbjct 23981 AATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACT--AGGTCACGTAGGAGC 23924
Query 105890 TGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTG 105949
|||||| | | ||||| || || || | | | | || ||||| | |||
Sbjct 23923 CAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTG 23864
Query 105950 TAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGT 106009
|||||||| ||||| ||||| || |||| || || | ||| |||||| ||||| |||
Sbjct 23863 TAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGT 23804
Query 106010 GCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAG 106069
|| | | |||| || || | ||| | | ||| || ||||| ||| | ||||
Sbjct 23803 GCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAG 23744
Query 106070 TCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACG 106127
|| | | | | || || |||| | ||||||||||||| || | | ||||||||
Sbjct 23743 TCCCACAGGTCA-CTAGGAGTCACAT-CCCACATATCAAACTGCAAGATGCCTTGGGAGA 23686
Query 106128 TGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCT 106187
|||||||||||| | || || | ||| | | | || | ||| ||
Sbjct 23685 CAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAG 23626
Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247
|| | ||||| || ||||||||||| || | || | || |||||| |
Sbjct 23625 TTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGG 23566
Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307
| ||||| | |||| || || | || || || || || ||||| | |||||
Sbjct 23565 ATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAA 23506
Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367
| || | ||| ||||| || || | || || || || || ||| || |
Sbjct 23505 TGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGA 23446
Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427
||| |||||||| || ||||| | |||| ||| || || |||| | | |||
Sbjct 23445 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 23386
Query 106428 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 106487
| | | | | | || | |||||||| | ||||| | ||||| ||||
Sbjct 23385 ACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAG 23326
Query 106488 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCG 106547
| |||||| | |||||| | ||| || || |||| ||| ||||| ||| |
Sbjct 23325 CGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGG 23266
Query 106548 TCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 106607
| || | ||| || || || ||||| |||||| || ||||||||||| | ||
Sbjct 23265 TACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGT 23206
Query 106608 TCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATG 106666
| || ||||| ||||| | || ||||| || | ||||| || | | || | ||||
Sbjct 23205 TGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG-ACAACC 23147
Query 106667 GCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 106726
| | || |||||| |||||||||| || || || |||||||| || |||
Sbjct 23146 ATGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTC-GCCATA 23088
Query 106727 GC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCTCCT 106784
|| || | | | | || || || | || || | |||| ||| | || || ||
Sbjct 23087 GCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCT 23029
Query 106785 CAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGA 106843
|||| ||||||||||| | ||| |||||||||| | || || || | | ||| ||
Sbjct 23028 CAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGA 22969
Query 106844 GCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCAT 106903
| ||||| | || ||||| ||||| || |||||||| | || ||| || ||||||
Sbjct 22968 -CTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATGCCAT 22910
Query 106904 GGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGC 106960
||||| ||||| | || | | ||| ||| ||| | || | ||||| ||
Sbjct 22909 GGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGG 22850
Query 106961 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 107020
|| ||| ||| || || || ||||| |||| || || | || ||| || || ||
Sbjct 22849 GCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCGTTAGTGCCA 22790
Query 107021 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCAC 107080
||| ||| | |||| | | | || | | | || ||||| |||||| |
Sbjct 22789 GCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCACCAGCCATC 22730
Query 107081 TTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTG 107140
|| || || ||||| | | || || | || || || | ||| ||| |||||
Sbjct 22729 TTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTC 22670
Query 107141 TTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTT 107200
|| ||| ||||| || |||| ||| | || ||||| ||||| ||||| ||
Sbjct 22669 ATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTA 22610
Query 107201 GGTGTTGCGTGAATGAA 107217
|||| ||||||| ||||
Sbjct 22609 GGTGATGCGTGAGTGAA 22593
>seq209
Length=70751
Score = 111 bits (122), Expect = 2e-19
Identities = 340/520 (65%), Gaps = 7/520 (1%)
Strand=Plus/Plus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| || |||||||| || |||||||| || ||||||||| || ||
Sbjct 41419 GCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCA 41478
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||||||||| ||||| || ||| | || | | ||| | || ||||| |||||
Sbjct 41479 GGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATG 41538
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAA 117452
||||| ||| ||||| |||| ||||||| ||| || | ||| | |||| | |
Sbjct 41539 CCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGAT 41597
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512
||| |||| ||||| | ||||| || || || | ||| | ||||| | ||
Sbjct 41598 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 41657
Query 117513 TAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTC 117572
| | | || || ||||| ||||| ||||||||| || || |||||
Sbjct 41658 CAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTC 41717
Query 117573 GCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCT 117631
|| | ||| ||| ||| | || | | ||||| |||| || ||| ||||
Sbjct 41718 AGAGTGGATGTTTTCCATCATGATCTGGA-AACCATAGAAGCAGCGGGCCTCGGGGATCT 41776
Query 117632 GCACTTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 117691
|||| || | | || | | || ||| || || || ||||| || ||||||
Sbjct 41777 GCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAA 41836
Query 117692 AGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGT 117748
|||| || || |||| ||||| | || || | || |||| || | |||||||
Sbjct 41837 AGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGT 41896
Query 117749 CGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||| ||||| || |||| ||||| || || ||||||||
Sbjct 41897 CGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 41936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589973727605160
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