Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq423 132 6e-26 >seq423 Length=76954 Score = 132 bits (146), Expect = 6e-26 Identities = 329/496 (66%), Gaps = 5/496 (1%) Strand=Plus/Plus Query 154627 TACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACC 154686 |||| |||||| | || | || || |||| ||| || || || ||||| || | Sbjct 53545 TACAGCCTAACTCTGGTGCCCAAGGAGAGTTTGCTGGTCTTCGTGCTATCCACCGCTATC 53604 Query 154687 ATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAA 154746 || | | | |||| | ||| | || | |||||||| || | || || ||||||| Sbjct 53605 ATGAGGAAAATGGAGGCAAGAAACGTGATATCTGTTTGATTCCTGTCTCTGCCCATGGAA 53664 Query 154747 CTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT---G 154803 | || ||||| |||| ||||||||| ||| ||||| | ||||||||||| Sbjct 53665 CCAACCCTGCCTCGGCTGCCATGGCAGGTATGCGTGTTGTTCCTATCAAGTGTGATACCA 53724 Query 154804 ATGATGGTAACATAGACATCAAAGATCTAGAGAAGAA-AGCAATCATGAATACATTTGAA 154862 | ||| ||| | || ||| ||||| ||| || |||| | | || | |||| Sbjct 53725 CTACTGGAAACTTGGATATCGCTGATCTGGAGGCCAAGTGCAA-AAAGCATGCTGATGAA 53783 Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 || || || ||||| || ||||| ||| |||| | |||||| || || | || Sbjct 53784 CTTGGCTGCATCATGATCACTTACCCTAGTACTTTTGGTATCTTTGAACCTGACGTCCGA 53843 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 || ||| | | || |||| | ||||| ||||| || | || || || || | Sbjct 53844 AAGGCCTGTGATCTTGTGCATGCTTACGGTGGCCAGGTGTACATGGACGGCGCCAACATG 53903 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 ||||| ||| | || || | || ||||| ||| || ||||| || || | ||| Sbjct 53904 AATGCCCAGATTGGTCTTACCTCTCCTGGTGAGATTGGCGCTGATGTGTGCCACTTGAAC 53963 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 | ||||| |||||||| ||||| ||||| ||||| || ||||| || |||||||| || Sbjct 53964 CTGCATAAGACATTCTGCATTCCTCATGGCGGTGGTGGCCCTGGTGTCGGTCCTATCTGT 54023 Query 155103 GTAGCAAAACATCTCA 155118 || |||||||||| Sbjct 54024 GTCAAGAAACATCTCA 54039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579205856686560