Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq598 197 3e-45 seq209 181 2e-40 >seq598 Length=260485 Score = 197 bits (218), Expect = 3e-45 Identities = 825/1279 (65%), Gaps = 55/1279 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | |||||||| ||| || |||||| Sbjct 23920 GGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAG 23861 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 || |||| || ||| ||||| ||||||||||| | ||||||||||| |||||||| || Sbjct 23860 GGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 23801 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTC 213085 || || ||| || | || || |||| || | | || || | |||||| Sbjct 23800 ACTAGAAGAGAATTGCGTACACCATGCT-GCTTAATCTTCTCCTTTAGAGAAGTCCAGTC 23742 Query 213086 CCATCTGCCAGACAGGTC-CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 || ||||||| || | |||| | |||||| ||||||||||||||||||| Sbjct 23741 CC---------ACAGGTCACTAG-GAGTCACATCCCACATATCAAACTGCAAGATGCCTT 23692 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 | || || |||| |||| ||||| | || | | || ||| | || | Sbjct 23691 GGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTG 23632 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || || || |||| ||||||||||||||| |||| | ||||||||| || | Sbjct 23631 AAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 23572 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | ||||| || ||||| | |||| | |||||||| ||||| || |||| Sbjct 23571 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 23512 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||| | ||| | || ||| ||| |||| |||| | ||||| || Sbjct 23511 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGC-TTCCTGGACAGGGTAGTGATTC 23453 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||| ||| |||||||| | |||| |||||| | | ||| Sbjct 23452 ACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTT----CGTGTA--GC 23399 Query 213444 TGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGC----GATGCT 213493 | || || | || | || || | ||| || ||| ||||| |||||| Sbjct 23398 TTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCT 23339 Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||||||| || || ||||| | || | | |||||| || ||||| |||||||| Sbjct 23338 ----AGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAG 23283 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCT 213612 ||| | || ||||| || || || | | | ||| ||||| | |||| || | Sbjct 23282 GTTCGAACTGCGAATGGTACCTAGATTTTTCT-GATTGCTCTTGCGGTTGCAGTGGTCTT 23224 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAG 213670 |||||||||| | ||| || ||||| ||| | | |||| | |||| ||| || Sbjct 23223 TGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAA--TGGCATACCACAG 23166 Query 213671 GTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAG 213730 | | ||||||||| ||| | ||| || | | | |||||||| ||| || || Sbjct 23165 TTTCTGGGCCTTGACAACCATGC-GACCGCGACCCTCCT--TCTCGTACTTTTCATACAG 23109 Query 213731 CTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789 | | || || | ||| || | | | ||| || || || ||| ||||||| Sbjct 23108 AGCCTCAAACTCTTCGCCATAGCAATCCG-CCAAGCCGGGGCATTCATTGGGGCACATGA 23050 Query 213790 GGCTCCAGTCC-CCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 | |||||||| | || |||| || | || |||||||| ||| || |||||| || Sbjct 23049 GAGTCCAGTCCTCATTCTTCTC-AACACGCTTCATGAACAAGTCGCAGATCCACAGGGCC 22991 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||| ||||| | | | || ||| ||| ||| ||||| | || || || Sbjct 22990 AAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAAC 22931 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965 || |||| || || ||||| ||||| | || ||||||||||| || || | |||| Sbjct 22930 TCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTT 22871 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || | ||| ||||||| | || || | ||| || | ||| Sbjct 22870 CCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCG 22811 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGG 214083 || || ||||| || || || || || ||||| | ||| | | | || ||| | Sbjct 22810 TTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTG 22751 Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143 ||| || || ||||| || |||||| |||||||| || | | | || || | Sbjct 22750 AGA--CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAA 22693 Query 214144 TGCCGGCCATGCTGTCATC 214162 |||| | ||||||||||| Sbjct 22692 TGCCCTCGATGCTGTCATC 22674 >seq209 Length=70751 Score = 181 bits (200), Expect = 2e-40 Identities = 556/850 (65%), Gaps = 26/850 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 41127 CTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 41186 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTA---TACACCCGTGTCAG-GCCCATCTGTTCCA 47954 ||||||| ||||||||| |||| | |||||| | || ||| | | | Sbjct 41187 CATGAAGTCGAAGGGGTT---TGTGGCACGGTACACCT-TCTCGTTGCCTAGAGCAACAA 41242 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 ||||| | || || || |||| ||||| | ||| || |||||| |||| | Sbjct 41243 GCAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCA 41302 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | ||||| ||||| || || ||||||||||| ||| ||||| || | | Sbjct 41303 GACCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGA 41362 Query 48075 TCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 ||| | || || || ||| || | ||||| ||| ||| | | |||| || Sbjct 41363 TCTTTTGCACAAGGTCCTTGCTGGGGCGGTTGTT---CAGATGCGAGA---ACAGCAGGC 41416 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | |||||||| |||||| ||| || || || || ||| |||| |||||| |||| Sbjct 41417 AAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGAC 41476 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||||| || | || |||||||| || | ||||| | ||| ||||| |||| Sbjct 41477 CAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGA 41536 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || || || || || || | || | || | | | |||||| | || Sbjct 41537 TGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGA 41596 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| || |||||||| ||||| |||||| || || || || ||||| || Sbjct 41597 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 41656 Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428 | || | ||| | | ||| | ||||| | | |||||| | ||| Sbjct 41657 ACAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGC---GAGTAGG 41713 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | |||||||| | || || || ||||||||| || |||||| | |||||| | Sbjct 41714 TTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCATAGAAGCAGCGGGCCTCGGGGA 41773 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||| || ||||| | ||| | ||||| || ||||| || ||||| || |||| Sbjct 41774 TCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAG 41833 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605 ||||||||||||| | || | ||| | |||||| | | | ||| |||| Sbjct 41834 CAAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCC 41893 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | || || ||| || | || || ||||||||||||| || || | Sbjct 41894 AGTCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGAGGCCTCGGCCT 41953 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 41954 TCTTGTACAT 41963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931521633250560