Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq598 197 3e-45
seq209 181 2e-40
>seq598
Length=260485
Score = 197 bits (218), Expect = 3e-45
Identities = 825/1279 (65%), Gaps = 55/1279 (4%)
Strand=Plus/Minus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | || || | | |||||||| ||| || ||||||
Sbjct 23920 GGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAG 23861
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
|| |||| || ||| ||||| ||||||||||| | ||||||||||| |||||||| ||
Sbjct 23860 GGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 23801
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCCCAGTC 213085
|| || ||| || | || || |||| || | | || || | ||||||
Sbjct 23800 ACTAGAAGAGAATTGCGTACACCATGCT-GCTTAATCTTCTCCTTTAGAGAAGTCCAGTC 23742
Query 213086 CCATCTGCCAGACAGGTC-CTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|| ||||||| || | |||| | |||||| |||||||||||||||||||
Sbjct 23741 CC---------ACAGGTCACTAG-GAGTCACATCCCACATATCAAACTGCAAGATGCCTT 23692
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
| || || |||| |||| ||||| | || | | || ||| | || |
Sbjct 23691 GGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTG 23632
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| || || || |||| ||||||||||||||| |||| | ||||||||| || |
Sbjct 23631 AAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTT 23572
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| ||||| || ||||| | |||| | |||||||| ||||| || ||||
Sbjct 23571 CAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGA 23512
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383
|| ||||| | ||| | || ||| ||| |||| |||| | ||||| ||
Sbjct 23511 CACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGC-TTCCTGGACAGGGTAGTGATTC 23453
Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443
|||||||| ||| |||||||| | |||| |||||| | | |||
Sbjct 23452 ACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTT----CGTGTA--GC 23399
Query 213444 TGATTGAACACGTAGCCCCC------GTCCTGCACAAACTCAGGCAGGGC----GATGCT 213493
| || || | || | || || | ||| || ||| ||||| ||||||
Sbjct 23398 TTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCT 23339
Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553
|||||||| || || ||||| | || | | |||||| || ||||| ||||||||
Sbjct 23338 ----AGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAG 23283
Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCT 213612
||| | || ||||| || || || | | | ||| ||||| | |||| || |
Sbjct 23282 GTTCGAACTGCGAATGGTACCTAGATTTTTCT-GATTGCTCTTGCGGTTGCAGTGGTCTT 23224
Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAG 213670
|||||||||| | ||| || ||||| ||| | | |||| | |||| ||| ||
Sbjct 23223 TGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAA--TGGCATACCACAG 23166
Query 213671 GTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAG 213730
| | ||||||||| ||| | ||| || | | | |||||||| ||| || ||
Sbjct 23165 TTTCTGGGCCTTGACAACCATGC-GACCGCGACCCTCCT--TCTCGTACTTTTCATACAG 23109
Query 213731 CTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGA 213789
| | || || | ||| || | | | ||| || || || ||| |||||||
Sbjct 23108 AGCCTCAAACTCTTCGCCATAGCAATCCG-CCAAGCCGGGGCATTCATTGGGGCACATGA 23050
Query 213790 GGCTCCAGTCC-CCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848
| |||||||| | || |||| || | || |||||||| ||| || |||||| ||
Sbjct 23049 GAGTCCAGTCCTCATTCTTCTC-AACACGCTTCATGAACAAGTCGCAGATCCACAGGGCC 22991
Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908
||| ||||| | | | || ||| ||| ||| ||||| | || || ||
Sbjct 22990 AAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAAC 22931
Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965
|| |||| || || ||||| ||||| | || ||||||||||| || || | ||||
Sbjct 22930 TCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTT 22871
Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025
|| |||||||| || | ||| ||||||| | || || | ||| || | |||
Sbjct 22870 CCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCG 22811
Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGG 214083
|| || ||||| || || || || || ||||| | ||| | | | || ||| |
Sbjct 22810 TTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTG 22751
Query 214084 AGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGA 214143
||| || || ||||| || |||||| |||||||| || | | | || || |
Sbjct 22750 AGA--CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAA 22693
Query 214144 TGCCGGCCATGCTGTCATC 214162
|||| | |||||||||||
Sbjct 22692 TGCCCTCGATGCTGTCATC 22674
>seq209
Length=70751
Score = 181 bits (200), Expect = 2e-40
Identities = 556/850 (65%), Gaps = 26/850 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||||
Sbjct 41127 CTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 41186
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTA---TACACCCGTGTCAG-GCCCATCTGTTCCA 47954
||||||| ||||||||| |||| | |||||| | || ||| | | |
Sbjct 41187 CATGAAGTCGAAGGGGTT---TGTGGCACGGTACACCT-TCTCGTTGCCTAGAGCAACAA 41242
Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014
||||| | || || || |||| ||||| | ||| || |||||| |||| |
Sbjct 41243 GCAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCA 41302
Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| ||||| ||||| || || ||||||||||| ||| ||||| || | |
Sbjct 41303 GACCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGA 41362
Query 48075 TCTGCTTAACGCGGGACT--CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
||| | || || || ||| || | ||||| ||| ||| | | |||| ||
Sbjct 41363 TCTTTTGCACAAGGTCCTTGCTGGGGCGGTTGTT---CAGATGCGAGA---ACAGCAGGC 41416
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
| |||||||| |||||| ||| || || || || ||| |||| |||||| ||||
Sbjct 41417 AAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGAC 41476
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||||||||| || | || |||||||| || | ||||| | ||| ||||| ||||
Sbjct 41477 CAGGCATGAGACCACGCTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGA 41536
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
||||||| || || || || || || | || | || | | | |||||| | ||
Sbjct 41537 TGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGA 41596
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371
|||| || |||||||| ||||| |||||| || || || || ||||| ||
Sbjct 41597 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 41656
Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428
| || | ||| | | ||| | ||||| | | |||||| | |||
Sbjct 41657 ACAGGTATGTGCGTTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGC---GAGTAGG 41713
Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488
| |||||||| | || || || ||||||||| || |||||| | |||||| |
Sbjct 41714 TTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCATAGAAGCAGCGGGCCTCGGGGA 41773
Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548
|||||| || ||||| | ||| | ||||| || ||||| || ||||| || ||||
Sbjct 41774 TCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAG 41833
Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA---GCATTCC 48605
||||||||||||| | || | ||| | |||||| | | | ||| ||||
Sbjct 41834 CAAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCC 41893
Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665
|| | || | || || ||| || | || || ||||||||||||| || || |
Sbjct 41894 AGTCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGAGGCCTCGGCCT 41953
Query 48666 TTTTGTACAT 48675
| ||||||||
Sbjct 41954 TCTTGTACAT 41963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931521633250560
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