Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq598 131 2e-25 seq753 93.3 4e-14 seq330 86.0 6e-12 >seq598 Length=260485 Score = 131 bits (144), Expect = 2e-25 Identities = 567/890 (64%), Gaps = 39/890 (4%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417 |||||||| ||||||||||| ||| | ||||| || || | | || || ||| Sbjct 24061 ATCTCCCAAACGGTCTTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGA 24002 Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT---GTCAT-CGTTGTAC--AGATTC 138471 ||| || ||| ||||||| |||||||| |||| |||| | | || |||| | Sbjct 24001 ATGGAGCCATTGTCCGCAATAATGCGATTCTTCATATTGTCAGACCATAAACCAAGAT-C 23943 Query 138472 AACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACT 138531 ||| | ||| || | || | ||| | |||||| || || || || | || Sbjct 23942 GACTAGGTCACGTAGG-----AGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACG 23888 Query 138532 CGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGA 138591 || || |||||||||| ||| | || || || | || ||||| ||||||||||| Sbjct 23887 CGGCGCTGGTAAATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGC 23828 Query 138592 GCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTG 138651 | |||| | || || |||||| || || | ||||||||| |||| ||| || |||| Sbjct 23827 GACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTA 23768 Query 138652 ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCG 138711 || ||||| || || | ||||||||||| || ||||| | | ||||||||| Sbjct 23767 ATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGGTCACTAGGAGTCACATCCCACATATCA 23708 Query 138712 TACTGTAACATTCCCAAACTTGCGGGACTG-----CCTTCGTACGAATCGTATACACCAA 138766 |||| || || | |||| | ||| | || || || | ||| ||| Sbjct 23707 AACTGCAAGATGC-----CTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCT 23653 Query 138767 ACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCT 138826 | || || | || | || || || | | ||| || ||||| ||||| Sbjct 23652 CCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCT 23593 Query 138827 GCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGT 138886 ||| |||||| || || || | | || | ||||||||||| ||| |||| Sbjct 23592 GCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGT 23533 Query 138887 CGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG- 138945 | ||||| || || || || || || | || || ||||||| || ||| ||| | Sbjct 23532 CAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGCA----TGTTGCTGTTGTGA 23477 Query 138946 GCTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACC 139002 ||||| || ||| || | || ||||||||||| ||||| || || || || || Sbjct 23476 GCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACT 23417 Query 139003 TTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCG 139062 | || | | || || ||| || || ||| ||||| ||| |||| | | Sbjct 23416 TGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAG--G 23359 Query 139063 ACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTG 139122 | | | | | || |||| ||||||||| || || || || ||| | | | Sbjct 23358 AAGGAAGGGCT-------AGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAG 23306 Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 || |||| ||| || | |||| || || || ||||||| ||||| |||||| Sbjct 23305 TACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTG 23246 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232 || || ||||| || |||||||| |||||| | || ||||||| || Sbjct 23245 CTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTC 23196 >seq753 Length=27693 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || || || ||||| || ||||| ||||| || || || | Sbjct 10931 GATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTC 10872 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 10871 GGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 10812 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| || || || |||||||||||| | | | |||| || || || Sbjct 10811 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAA 10752 Query 24883 CATTCAAAAGG 24893 |||||| |||| Sbjct 10751 CATTCAGAAGG 10741 >seq330 Length=314808 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || ||||| || ||||| || || || || | | ||||| | || | Sbjct 237032 AAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATCGACAAC 237091 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || || || || || || || || || ||||||||| Sbjct 237092 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTGATCTTT 237151 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || ||||| |||||| | | |||| || || ||||| || ||||| || Sbjct 237152 GCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCC 237211 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| | || |||| |||| || || Sbjct 237212 ACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 237243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892206852520