Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq598 181 1e-40 seq209 159 3e-34 seq249 113 4e-20 seq753 100 3e-16 seq330 98.7 1e-15 >seq598 Length=260485 Score = 181 bits (200), Expect = 1e-40 Identities = 1099/1742 (63%), Gaps = 51/1742 (3%) Strand=Plus/Minus Query 148062 TGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGT---CGCTTTATCTTCATC 148118 ||||||||||| || ||||| ||||| ||||||| | | | |||| ||| Sbjct 24115 TGGTCAATGAAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAA---ATC 24059 Query 148119 TCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACC 148178 ||||| | ||||||||||| || |||| | | ||||||| |||| ||| | Sbjct 24058 TCCCAAACGGTCTTGTACAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATG 23999 Query 148179 GAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATC 148238 ||||| || ||||| ||| |||| ||| | ||| | ||| || |||| Sbjct 23998 GAGCCATTGTCCGCAATAATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACT 23939 Query 148239 AGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA 148298 |||||| | || | | || || ||||| |||||||| || || ||||| ||| | Sbjct 23938 AGGTCACGTAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGG 23879 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||| || | ||||| || |||| |||||||||| |||||||| || | Sbjct 23878 TAAATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTG 23819 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || |||||| || || || || || ||||| | ||| | | || || || | Sbjct 23818 GCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCC 23759 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGAC--GGTGTCACGTTCCACATGTCGTACTGCA 148476 || |||| | ||||||||| | || || || ||||| | |||||| || |||||| Sbjct 23758 TTTAGAGAAGTCCAGTCCCACA--GGTCACTAGGAGTCACATCCCACATATCAAACTGCA 23701 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536 ||||| || | || ||||| || | ||| | || | || | || | Sbjct 23700 AGATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGA 23641 Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 ||| || || ||| ||| ||| || || || ||| ||| |||||||| Sbjct 23640 TTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCT 23581 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 | || | ||| | ||||| || || | || ||||| || ||||||| Sbjct 23580 GGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCT 23521 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGAT 148716 |||| || || |||||||| ||||| |||||| | | | || || || || | Sbjct 23520 GTACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGT 23461 Query 148717 AGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCA 148776 |||| || |||||||| || || ||||| || || || | || | | | | | Sbjct 23460 AGTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTA 23401 Query 148777 GCAATTCAAAATCGTAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAG 148827 || || ||| || ||| |||| || |||| | | | | ||| | || Sbjct 23400 GCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGG---AAGGGCTAGAG 23344 Query 148828 AGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACA 148887 | ||||| |||||||| || |||||| ||||| | |||||| | ||||| | ||||| Sbjct 23343 ATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACA 23284 Query 148888 GATT---GCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGT 148944 | || |||| || | || | || || ||||||||||||| |||||| || Sbjct 23283 GGTTCGAACTGCGAATGGT---ACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGT 23227 Query 148945 CCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATG 149002 | ||||| ||||| | || |||||| || ||| | |||| ||| | | | Sbjct 23226 CTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCA-- 23169 Query 149003 CAGGTCCTGCGCGCGCACTTGC-TGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACA 149061 ||| | ||| || || | ||| ||||||||||| |||||| ||||| Sbjct 23168 CAGTTTCTGGGCCTTGACAACCATGC-GACCGCGACCCTCCTTCTCGTACTTTTCATACA 23110 Query 149062 GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGA 149121 | ||| ||| | ||||| |||||||| | | |||||||| | | |||||||||| Sbjct 23109 GAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGA 23050 Query 149122 GCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGT 149181 | | ||| | | | | | || |||||||| |||| ||| | ||| || || Sbjct 23049 GAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCA 22990 Query 149182 ACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGC 149241 | | ||||| || || | ||||| || ||| ||| | || ||| | Sbjct 22989 AGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACT 22930 Query 149242 TGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---C 149298 ||| | || || ||||| ||||| | || | || | || || |||||| | Sbjct 22929 CGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTC 22870 Query 149299 CGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC 149358 | |||||||| || | || | ||||||| || || || | ||| || | ||||| Sbjct 22869 CACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGT 22810 Query 149359 TGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTG 149417 | | ||| |||||||| ||| |||| | ||| || || | ||| || ||| Sbjct 22809 TCGAAGTACCGTTAGTGCCAGC-AATGTAAGAGCCAGTGGCACGAATACGGTGAACATTG 22751 Query 149418 ACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGA 149475 | ||||| || || ||| | ||| || || || | |||| ||| || ||| | Sbjct 22750 AGACCGATACCACCAGCCAT-CTTGGAAATCATGGCACAAGTC-TTGAGGGTATCGTAAA 22693 Query 149476 TGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAAC 149535 |||||||||||||||| ||||||| | || || || || ||| || | Sbjct 22692 TGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGG 22633 Query 149536 GCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATC 149594 | || ||||| || | || || ||||| || || | || || | ||| | Sbjct 22632 GAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAG-ACATAAGG 22574 Query 149595 TCGTACGACTCGAGCACGCGGTCCA---TGTCATCGCCATGGATGCCTATGGCGACGCGC 149651 | ||| | || ||||| || || | ||||| | ||| || || | || || ||| Sbjct 22573 TTGTAGGTTTCAAGCACACGATCGACTTTGTCA-CCCCA--AATACCCACAGCAACACGC 22517 Query 149652 ATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTT 149711 || | ||| ||||| || ||||| | | || ||| |||||| | ||| Sbjct 22516 ATTATCATGTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGC 22457 Query 149712 TCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCG 149771 || || ||||| |||||||||||| ||||| ||||| ||| ||| ||||||| | | Sbjct 22456 TCGAGCGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGAG 22397 Query 149772 TC 149773 || Sbjct 22396 TC 22395 >seq209 Length=70751 Score = 159 bits (176), Expect = 3e-34 Identities = 356/525 (68%), Gaps = 21/525 (4%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| |||||||| || ||||| || ||||| || ||||| | | ||| ||||| | Sbjct 41127 CTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTAGTCTTGCCGCCGAGCGAGATGTTCTC 41186 Query 120411 CATAAACTCGAACGGGTTGCTCGC--GTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| ||||| | || | || | | ||| | ||| | || ||| Sbjct 41187 CATGAAGTCGAAGGGGTTTGTGGCACGGTACACCTTCTCG--TTGCCTAGAGCAACAAGC 41244 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCA-A 120527 || ||||| || |||||||||||||||| ||| | |||||||| || |||| | Sbjct 41245 AGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGA 41304 Query 120528 CGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACAT 120587 | || |||| ||| || | ||||||||||| || | || || || ||| || Sbjct 41305 CCGCAG-GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGAT 41363 Query 120588 GGCGAGCATAGTGTG---GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644 ||| | || || ||| |||| | |||||| | | | |||||| Sbjct 41364 CTTTTGCACAAGGTCCTTGCTGGGGCGGTTGT-TCAGATGCGAGAACAG-----CAGGCA 41417 Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704 |||||||| |||||||||||||| || || || || |||||||| || ||||| || Sbjct 41418 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 41477 Query 120705 GGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||||||| || || |||| | |||| |||| ||| ||| ||| || || || Sbjct 41478 AGGCATGAGACCA--CG-CTTGCGCAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAA 41534 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | |||||| || |||||||| || | ||||| ||| ||||||| | |||| | Sbjct 41535 GATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGT 41594 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 ||||||||||| ||||| |||||||| ||| | ||| || || Sbjct 41595 GATCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAAT 41639 >seq249 Length=99862 Score = 113 bits (124), Expect = 4e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| | ||| | | | ||||| |||||||| || Sbjct 88387 GTAGATTCTTTCTGAATGTTGTAGTCGGAAAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 88445 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 88446 GGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 88505 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| || ||| || |||| ||| | ||| || ||||| || || Sbjct 88506 GACGTTGTCAATGGTGTCGGAGGACTCGACTTCGAGGGTAATGGTCTTTCCGGTAAGGGT 88565 Query 133643 TTTTAC 133648 || || Sbjct 88566 CTTGAC 88571 Score = 113 bits (124), Expect = 4e-20 Identities = 132/176 (75%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| || Sbjct 88671 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 88729 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| |||||||| || |||||||| |||||| ||| Sbjct 88730 AGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGACTT 88789 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | |||| || || | || |||||| |||| ||||| ||| ||||| |||| Sbjct 88790 AACGTTGTCAATAGTATCCGAGGACTCCACCTCGAGGGTGATGGTCTTGCCAGTCA 88845 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| | ||| | | | ||||| |||||||| || Sbjct 88159 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCA-TCCTCAAGCTGCTTTCC 88217 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| |||||||| || ||||| || |||||| ||| Sbjct 88218 AGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGATCTTGGACTT 88277 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | || ||| || |||| ||| | ||| ||||| |||| || Sbjct 88278 GACATTGTCAATGGTATCAGAGGACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGGT 88337 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 88338 CTTGACGAAGATTTGCAT 88355 >seq753 Length=27693 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||||||||| || || ||||| |||||| Sbjct 10776 TCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 10835 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||| | || ||| || |||| ||| | Sbjct 10836 TCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAATC 10895 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || || || |||||||||||||| Sbjct 10896 GTCTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 10930 >seq330 Length=314808 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| || ||| | | | ||||| |||||||| | Sbjct 237214 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCA-TCCTCAAGCTGCTTAC 237156 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | ||||||||||| || || ||||| |||||||| |||||| || Sbjct 237155 CAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACT 237096 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || || | ||| | ||| || || ||||| | Sbjct 237095 TGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGG 237036 Query 133642 TTTTTACGAAA 133652 | || |||||| Sbjct 237035 TCTTGACGAAA 237025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415004993160