Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq249 111 1e-19 >seq249 Length=99862 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| |||| ||||| || | ||||| || || || || ||||||||| Sbjct 88128 GCCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 88187 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | |||| | || || ||||| || || ||| | ||||||||||| || ||||| || Sbjct 88188 GAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 88247 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| ||||| ||||||| || | | || | || || | || || || Sbjct 88248 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGAC 88307 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || || || | |||||||||| || || || |||||||||||| Sbjct 88308 TTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCATA 88356 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||| ||||| || | ||||| ||||| ||||| ||||||||| Sbjct 88357 CCACCACGCAGACGCAGGACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCGGAA 88416 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || ||||| || |||||| | ||||||||||| || ||||| || Sbjct 88417 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGA 88476 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| || | | | || | ||||| | || || ||| Sbjct 88477 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCGACT 88536 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 || || || || | || || || || || || |||| Sbjct 88537 TCGAGGGTAATGGTCTTTCCGGTAAGGGTCTTGACAA 88573 Score = 82.4 bits (90), Expect = 6e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| ||||||||| || | |||| | || || ||||| || || Sbjct 88671 GTAGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTTCCA 88730 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | |||||| || || |||||| || Sbjct 88731 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTAGACTTA 88790 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 | | | || | ||| || | || || || || || || || | ||||| |||| Sbjct 88791 ACGTTGTCAATAGTATCCGAGGACTCCACCTCGAGGGTGATGGTCTTGCCAGTCA 88845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929433446408