Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq209 105 8e-18 >seq209 Length=70751 Score = 105 bits (116), Expect = 8e-18 Identities = 346/525 (66%), Gaps = 17/525 (3%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 94497 ||||||||||| ||| | ||||| || |||||| | |||| ||||| | ||| || Sbjct 41936 TGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 41877 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 41876 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 41817 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || || ||| || | | ||| | | |||||||| |||| | || || | | Sbjct 41816 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 41758 Query 94617 CTTCTATGCGTATCAGTGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||||| | ||| |||| ||| ||| | || || || ||| || | Sbjct 41757 CTTCTATGGTTTCCAGA-TCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 41699 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCT-TTGAA-GCCATCCAAAC 94733 | |||| || || ||||| | || || || || || || ||||| | || Sbjct 41698 TTGACACCTACATCAAGGA--GCCCTCGCAACGCACATACCTGTTCAATGCCATTGACAC 41641 Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTC 94790 |||| || || | || || || |||||| |||||||| | |||| |||| Sbjct 41640 TATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTC 41581 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| || Sbjct 41580 GA---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGG 41524 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 ||||| | | || | ||||| ||||| ||||||||||| ||||| |||||| Sbjct 41523 CGCCTTCGCCTCCATCTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTC 41464 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||||| |||||||| ||||| || ||| || ||||| Sbjct 41463 AAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 41419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583253808161160