Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016-
01-13] 959 sequences; 30,717,923 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq598 266 4e-66
seq249 181 1e-40
seq753 145 9e-30
seq330 145 9e-30
seq54 87.8 2e-12
>seq598
Length=260485
Score = 266 bits (294), Expect = 4e-66
Identities = 1133/1760 (64%), Gaps = 69/1760 (4%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| |||| |||| |||||||||||||||||||| || |||||||| | ||||
Sbjct 24232 GCCTGCGTACGCAAGTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGC 24173
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| ||| | | ||||| | | |||| ||||| |||||||| || ||
Sbjct 24172 ATGCTGGTGATCTTGCCCATGGTGGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGG 24113
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCAT 80211
|||||||| |||||||| || ||||||| | || || || | ||| |||||
Sbjct 24112 TCAATGAAAGCACCACGATCAGCAGCCATTTGCACAACTGTACGCTGGGAAATCTCCCAA 24053
Query 80212 ACTGTACGATACAC--CTTACGAAGCTCCTCTGGAATG-TCCAGATTTT--GCACACTGC 80266
|| || |||| ||| || || | |||||| | |||| || | | ||
Sbjct 24052 ACGGTCTTGTACAGAGCTTT--AATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGC 23995
Query 80267 CACCGTCCTTTACAATTTGATTTTTCA-ATT--CAGACGTCCAGACACCAAGCTTGTGCA 80323
|| |||| | ||| |||| |||| ||| ||||| || | |||||| | | |
Sbjct 23994 CATTGTCCGCAATAATGCGATTCTTCATATTGTCAGAC---CATAAACCAAGATCGACTA 23938
Query 80324 GATCTTTCACA-AGGTGCTTGTTAATCATGACA---AACTCTCCCGCGAGGGTGCGACGC 80379
| || || ||| || | | | ||| ||||| || || || ||| |||
Sbjct 23937 GGTC----ACGTAGGAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGC 23882
Query 80380 AGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTG 80439
| || | ||| | ||||| || || || ||| ||||| || || ||||| | ||||
Sbjct 23881 TGGTAAATGTTGGATGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTG 23822
Query 80440 CTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCC 80499
|| || || ||||| || | || | || ||||| || | || |||| ||| || | |
Sbjct 23821 CTGGCTGTAGGCATGGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTC 23762
Query 80500 TCGCGCAAATCTGACCAAAAATCAACCCCAA--CGCT----GTGAC--CCCACATGTCGT 80551
|| | | | ||| || || || | || || || ||||||| ||
Sbjct 23761 TCCTTTAGAGAAGTCCAG---TC--CCACAGGTCACTAGGAGTCACATCCCACATATCAA 23707
Query 80552 GCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCT 80611
|||||||||||| | || | ||||| ||| | | || ||| | ||||||||||
Sbjct 23706 ACTGCAAGATGCCTTGGGAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCT 23647
Query 80612 TGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGT 80671
||| | || || | | || || ||||| || ||| ||||| | |||||
Sbjct 23646 GGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGT 23587
Query 80672 TCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCA 80731
| | ||| || | ||| || || | || || | | ||| |||||||||
Sbjct 23586 TGAGCTGGCGTGCTTCAGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCA 23527
Query 80732 GGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGA 80790
||||||| || |||| | || || ||||||||| |||| | | | | || ||| |
Sbjct 23526 GGCCCTGTACACCGACACCAATGGGACGGTGGCGCATGTTGCTGTTG-TGAGCTTCCTGG 23468
Query 80791 ATTGGGTAAAAGTTATT---ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTA 80847
| ||||| || ||| |||||||| |||||| |||||||| |||||| | ||
Sbjct 23467 ACAGGGTA---GTGATTCACATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTG 23411
Query 80848 ACATCATGAAGTTTCTGAAAGTCGAATTG------GTTCCCCTTCACAAATGCCGGAAGG 80901
|| || || || || | |||||| | | ||| | ||| || | ||||||
Sbjct 23410 ACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGG 23351
Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG---CATCTGTAAACTCGACGATT 80958
|| || || || |||||||| || ||||| |||| || | ||| ||||| ||
Sbjct 23350 GCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGGGCA-CAGTA--CTCGATAATC 23294
Query 80959 TCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTG 81018
|| ||||||| || ||| ||| ||||| || |||||||| || |||| ||||
Sbjct 23293 TCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTG 23234
Query 81019 CAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCG 81078
|| ||| |||||| ||| | ||| | || ||||| ||| | || || |||||
Sbjct 23233 CAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCA 23174
Query 81079 TCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCG 81138
| ||| | | | |||||||| ||| |||| || || | | ||||| |
Sbjct 23173 TACCACAGTTTCTGGGCCTTGACAACCATGCGACCGCGACCCTCCTTCTCGTACTTTTCA 23114
Query 81139 TAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCAC 81198
|| | || |||| | || | || | | | | ||||| || || ||||||
Sbjct 23113 TACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCAC 23054
Query 81199 ATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGG 81258
|| || |||||| | ||||| ||| ||||||||| ||| |||||| |||
Sbjct 23053 ATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGG 22994
Query 81259 GCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAG 81317
|| ||| ||||| || ||| || | || || | || ||||| ||| || |||||
Sbjct 22993 GCCAAGAATAGGTCACGAGCA-CGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAG 22935
Query 81318 AAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCGACG 81377
|| || | || || |||||||||||||| ||||| | ||| | | || ||
Sbjct 22934 GAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTT 22875
Query 81378 G---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGAT 81434
| |||||||||| || |||||||| || ||| || ||||| | ||| || | |||
Sbjct 22874 GTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGAT 22815
Query 81435 ACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--CACCTTGCTG 81492
|| | || |||||| || || | || || || |||| || || ||
Sbjct 22814 GCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAAC 22755
Query 81493 ATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCA 81552
|||| |||||||| ||||| | | ||| |||||| ||||| || | ||| ||
Sbjct 22754 ATTG--AGACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCG 22697
Query 81553 TAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGG 81612
||||| ||||||||||| || | |||||||| | | |||||| |||| |||| |
Sbjct 22696 TAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGA--G 22639
Query 81613 CTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACA 81670
| | ||| |||||||| || || || || | |||||| |||| | | | ||||
Sbjct 22638 CCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACA 22579
Query 81671 TCAGGTCATAGGTTTCCTTGACGCG-TGGAATATCGTCACCGTGAATACCGATAGCTACA 81729
| |||| |||||||| || || | || | | |||||| |||||| | ||| |||
Sbjct 22578 TAAGGTTGTAGGTTTCAAGCACACGATCGACT-TTGTCACCCCAAATACCCACAGCAACA 22520
Query 81730 CGCATAAACATGTACTGGGG 81749
||||| | ||||| ||||||
Sbjct 22519 CGCATTATCATGTGCTGGGG 22500
>seq249
Length=99862
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| | || |||||||| ||||| || || || ||||| |
Sbjct 88355 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 88296
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | ||| | || || ||||| |||||||| || ||||| ||||||
Sbjct 88295 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCGGACCAG 88236
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 88235 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 88176
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| || |||||||| | || ||||||| || ||||| ||
Sbjct 88175 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGCCA 88126
Score = 167 bits (184), Expect = 3e-36
Identities = 167/217 (77%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 27416 TTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTG 27475
|||||||||| |||||||| ||||| ||||| || || || ||||| || | |||||
Sbjct 88573 TTGTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTG 88514
Query 27476 CAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAA 27535
|| | ||| | || || |||||||||||||| |||||||| |||||||||||||| |
Sbjct 88513 ACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCA 88454
Query 27536 TTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGG 27595
| || || || ||||| || ||||||| || ||||| | ||||| || | || || |
Sbjct 88453 TCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCCGACTACAACATTCAGAAAG 88394
Query 27596 AATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| | ||| ||||||| || |||||
Sbjct 88393 AATCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGG 88357
Score = 145 bits (160), Expect = 9e-30
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || || ||||| ||||| |||| |||| || | ||| ||
Sbjct 88843 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATTGACAACGTTAAGTCT 88784
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| |||||||||||||| || || ||||| |||
Sbjct 88783 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAAAG 88724
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| || ||||||| || ||||| | ||||| || | || ||||| || ||||| |||
Sbjct 88723 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTCCAT 88664
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
||||| | || || || |||||
Sbjct 88663 CTAGTGCTCCGCCTGCGTGGTGG 88641
>seq753
Length=27693
Score = 145 bits (160), Expect = 9e-30
Identities = 146/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| ||||| || ||||| ||||| || |||||||||||
Sbjct 10930 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCCTCG 10871
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| | || ||||||||||||||||| ||||| || ||||||
Sbjct 10870 GACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 10811
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || ||||||| |||||||| | ||||| ||
Sbjct 10810 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAAC 10751
Query 27586 GTCCAAAAGG 27595
| || ||||
Sbjct 10750 ATTCAGAAGG 10741
>seq330
Length=314808
Score = 145 bits (160), Expect = 9e-30
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || ||||| ||||| || | ||
Sbjct 237026 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 237085
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || |||||||||||||| ||||| || ||||||||||| |
Sbjct 237086 GACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTG 237145
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| |||||||||||||| || ||||||| || || || | ||||| || |||| |||
Sbjct 237146 ATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAAG 237205
Query 27595 GAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || || || ||| |||| || || |||||
Sbjct 237206 GAGTCCACCCTCCACCTTGTCCTGCGCCTGCGTGGTGG 237243
>seq54
Length=183442
Score = 87.8 bits (96), Expect = 2e-12
Identities = 169/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 31983 GGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GT 32041
||| ||| | |||||| ||||| ||||| || ||||| ||| ||| || ||| | ||
Sbjct 110345 GGATGGCTTTAAGCCTGGTCAGCGGAAGGTCATTTACGCGTGCTTCAGCAAAAACATTGT 110404
Query 32042 CGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACC 32101
| || || |||||||| | ||||| | || | || | | || || |||| || |
Sbjct 110405 CCAG-GATATGAAGGTTGTTGAGCTGGCTGGTTTTGTTTCTGGACATACCTCCTACCAAC 110463
Query 32102 ACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAA 32161
|||| || || || || || |||||| | || |||||| ||||||||||| | |
Sbjct 110464 ACGGAGAAGCATCCCTACAACAAACCATTATTGGTCTGGCTCAGGACTTTGTCGGTTCCA 110523
Query 32162 ATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGG 32221
| ||| | |||| || ||||| ||| | || || | || || || ||||| ||
Sbjct 110524 ACAACATAAACTGTCTGGAGCCCAGTGGTAACTTCGGTTCGCGTCTTGCTGGTGGTTCGG 110583
Query 32222 ATGCTGC 32228
|||||||
Sbjct 110584 ATGCTGC 110590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570303563404080
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