Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq281 84.2 2e-11 >seq281 Length=219731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 184/276 (67%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 30082 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30141 ||||||||| || || ||||| ||| || |||||||| ||| || ||||| Sbjct 25247 GTGGCACGGTGGCAGCGCCATCTTCTTCAAATCCGCAGGGTTCCAAGCGGTCATAATGAT 25306 Query 30142 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCC 30201 |||| || | |||||| || ||| || | | | | ||||||||| || || Sbjct 25307 ACGCCGATCGTACGGGTTGGTCTTGAGTTTGTGGATGACTTCAGCCAGCTGATCAACACC 25366 Query 30202 CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 |||| ||||||| | | ||| ||||| ||||||||||| | |||||| || Sbjct 25367 TTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGGCTCCGAAATGGCGCCACTGAAA 25426 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321 ||||| || || || || || || |||| | ||| | | ||| || || | ||| Sbjct 25427 GCCGTATACAGGCCCTAGATCGCCAACTTCACGGTGGCCTAGACCCGCGTTATCAAGAAA 25486 Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 || | || |||||| | ||||||||||| || || Sbjct 25487 CTCGCGCGAGCCGTTGCCATCCCAGATCTTGACACC 25522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305651120228