Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq330 183 6e-41 seq249 156 9e-33 seq753 152 1e-31 seq209 125 1e-23 seq54 86.0 1e-11 >seq330 Length=314808 Score = 183 bits (202), Expect = 6e-41 Identities = 172/219 (79%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || |||||||||||||| | Sbjct 237244 ACCACCACGCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 237185 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || ||||||||||| || || ||||| || Sbjct 237184 CAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGGGG 237125 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | ||||| |||||||||| ||||| Sbjct 237124 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGAC 237065 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || || || || ||||||||||||| ||||| ||||| Sbjct 237064 CTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 237026 >seq249 Length=99862 Score = 156 bits (172), Expect = 9e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || |||||| || ||||||||||| | Sbjct 88356 ACCACCACGCAGACGCAGGACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCGGA 88415 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 88416 AAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGG 88475 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || ||| | || || ||||| || | ||||| Sbjct 88476 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCGAC 88535 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 |||||| || || ||||| || || | ||||| || Sbjct 88536 TTCGAGGGTAATGGTCTTTCCGGTAAGGGTCTTGAC 88571 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || |||| || | || || || |||||||||||||| | Sbjct 88129 CCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 88188 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || || ||||| | ||| || ||||| || Sbjct 88189 AGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 88248 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || |||||||| | || || | || || || || || | |||||| Sbjct 88249 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGACT 88308 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| |||||||| ||||| ||||| || ||||| Sbjct 88309 TCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 88355 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || ||||| | || || || || ||||||||||| | Sbjct 88640 ACCACCACGCAGGCGGAGCACTAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGA 88699 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || || ||||| | ||| || ||||| || Sbjct 88700 CAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 88759 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | || ||||| ||||| | || || Sbjct 88760 GATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCCGAGGACTCCAC 88819 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 ||||| ||||| ||||| || |||| Sbjct 88820 CTCGAGGGTGATGGTCTTGCCAGTCA 88845 >seq753 Length=27693 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || ||||||||||||| || || ||||||||||| || || || || || |||||| Sbjct 10743 TTCTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 10802 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || ||||| ||||| ||||||||||| || ||||| | || || | ||| Sbjct 10803 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 10862 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091 ||||||||||| | || || ||||| || |||||||||||||| | ||||| ||||| Sbjct 10863 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 10922 Query 283092 ATCTGCATTTTCATATACA 283110 |||||||| || | |||| Sbjct 10923 ATCTGCATCTTGACCTACA 10941 >seq209 Length=70751 Score = 125 bits (138), Expect = 1e-23 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 230154 GTGAAACAAATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATT 230213 ||| || | ||| |||| || | || | | || ||||||||| | ||| ||| | Sbjct 41372 GTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTG 41313 Query 230214 CCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCT 230273 || ||| |||| | || ||||| |||||||| ||| ||| || || || || || ||| Sbjct 41312 CCCTGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCT 41253 Query 230274 GATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCT 230333 || || | | || || ||||| ||||||| ||||| ||| |||||||||| Sbjct 41252 GACCGCCTGCTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGAC 41193 Query 230334 TTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGAT 230393 || |||||| ||| || ||| || || |||||||||||||| ||||||||| |||| Sbjct 41192 TTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTCGAGAAGCGTGTCGGCGAC 41133 Query 230394 TATCAAAGGCCCGGTGT 230410 || || | | | ||||| Sbjct 41132 TACCAGAAGGCTGGTGT 41116 >seq54 Length=183442 Score = 86.0 bits (94), Expect = 1e-11 Identities = 206/306 (67%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 274494 TGGAAAAAGTTCATGACAAGACC--TGATATGTGAGTTCCGTCAACGTCGGCATCTGTCA 274551 |||| ||||| || | ||| || ||||||||||| || ||| || ||| | || Sbjct 109873 TGGAGGAAGTTGATCAAAAGTCCCTTGATATGTGAG--CCATCATGATCCTGATCAGCCA 109816 Query 274552 TGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCCTGT--TTG 274609 ||||||| | ||| ||||| ||||| ||||| |||| | || || ||| || Sbjct 109815 TGATCATGAGATGGCCATAACGAAGACTCTTGGTATCAGTATATA-CTGCCTTGTGCTTC 109757 Query 274610 AAGCCCAAGAATTTGCTTGAGAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCCACAGA 274669 | ||||| || | |||||| | ||| || | |||||| ||||| ||| || Sbjct 109756 AGGCCCATAAACT-GCTTGATATTCTGGATCTCCTGGTTCTTGGTGATTTGGTCCAGCGA 109698 Query 274670 AGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGCGCCC 274729 |||||||| || || |||| |||||| ||||||||||| || || | ||| | | Sbjct 109697 TGCATCACGGACATTGAGCATCTTACCACGGAGAGGGAACACACCGATGCGGTCGGGGTC 109638 Query 274730 GATGACCGAAAGACCGGCGATCGCGAGAGTTGCTGCTGAATCTCCCTCTGTGAGAATCAA 274789 || | || | | || || | || | | | ||||| || ||||| || |||||||| Sbjct 109637 GAGAATCGCACGGCCTGCAACAGCCAAACTCTTGGCTGAGTCACCCTCAGTCAGAATCAA 109578 Query 274790 AGTACA 274795 ||| || Sbjct 109577 AGTGCA 109572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046726338519186