Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20eucalypticola_20[genbank_20GCA_5F001513815.1_202016- 01-13] 959 sequences; 30,717,923 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq249 132 3e-26 seq330 120 2e-22 seq753 102 6e-17 >seq249 Length=99862 Score = 132 bits (146), Expect = 3e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | || |||| |||||| || |||||| ||||||||||| |||| | Sbjct 88129 CCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 88188 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| || || ||||| | ||||||||| || | ||| Sbjct 88189 AGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 88248 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | ||| ||||| ||| ||||| ||| || ||| | ||||| || | ||| || | Sbjct 88249 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGT--CAATGGTATCAGAGGACTCGA 88306 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | ||||| ||||| ||||| | |||||| |||||||||||||| Sbjct 88307 CTTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 88355 >seq330 Length=314808 Score = 120 bits (132), Expect = 2e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || || ||||| || ||| |||||| ||||||||||| ||| Sbjct 237246 ATACCACCACGCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 237187 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || ||| | || || |||||||| || ||||||||||| |||||||| || | Sbjct 237186 GACAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGG 237127 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | || ||||| ||| ||||| ||| | | | || ||||| | || || Sbjct 237126 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCG 237067 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328 ||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 237066 ACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 237026 >seq753 Length=27693 Score = 102 bits (112), Expect = 6e-17 Identities = 139/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| || |||||||| || | || || | || ||||||||||| || || |||| Sbjct 10741 CCTTCTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 10800 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||| |||||||| || | || | || ||||| ||| ||||| ||| || ||| Sbjct 10801 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 10860 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | || ||||| | ||| || ||||| | ||||||||||| ||||| |||||||| || Sbjct 10861 --CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGAC 10918 Query 44326 GAAGATTTGCAT 44337 ||| || ||||| Sbjct 10919 GAAAATCTGCAT 10930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986192499703