Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03-
03] 1,257 sequences; 26,782,037 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq85 96.9 2e-15
>seq85
Length=66049
Score = 96.9 bits (106), Expect = 2e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|||||| | |||||||| ||||| || || || | || || || | ||||| ||||
Sbjct 3062 CGTCTCGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCGGGTGCTTTTGCCTCCATC 3121
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
||||||||| || ||| |||||||| || || | || ||||||||| |||| |
Sbjct 3122 TTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCCAACGAGCTGATCTCC 3181
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCT 22898
||||| || || || ||| |||||||||||| ||||
Sbjct 3182 CGTGATGAGGGCCTTCACACTGACTTTGCTTGCCTGCT 3219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356228142612571
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |