Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03-
03] 1,257 sequences; 26,782,037 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq12 82.4 7e-11
>seq12
Length=124593
Score = 82.4 bits (90), Expect = 7e-11
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 5669 CCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGG 5728
|| |||||||| ||||| || || || ||||| ||| |||||||||||| | || |||
Sbjct 62575 CCACGGTAGTCAGCGTCGATAACACCAGCGCCAGTGTCAATGAAGTGCTTGGCAGCAAGG 62516
Query 5729 CCGGAGCGGGGAGCCACGCGGCCGT 5753
|| ||||||||||| | ||||||||
Sbjct 62515 CCAGAGCGGGGAGCGATGCGGCCGT 62491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430047811700984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |