Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq12 82.4 7e-11 >seq12 Length=124593 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 5669 CCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGG 5728 || |||||||| ||||| || || || ||||| ||| |||||||||||| | || ||| Sbjct 62575 CCACGGTAGTCAGCGTCGATAACACCAGCGCCAGTGTCAATGAAGTGCTTGGCAGCAAGG 62516 Query 5729 CCGGAGCGGGGAGCCACGCGGCCGT 5753 || ||||||||||| | |||||||| Sbjct 62515 CCAGAGCGGGGAGCGATGCGGCCGT 62491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430047811700984