Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03-
03] 1,257 sequences; 26,782,037 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq15 170 3e-38
seq519 105 1e-18
>seq15
Length=121573
Score = 170 bits (188), Expect = 3e-38
Identities = 200/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || ||||| || || ||||||||||| |||||
Sbjct 21208 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCTGCTAT 21150
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| |||||||||||||| ||||||||| |||||| || |||| |||||||
Sbjct 21149 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGAC 21090
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | ||| || ||| | || || | ||| || || || || ||
Sbjct 21089 CCGTGGTGTCCTCAAGTCTTTTCTCGAAGGTGTCATTCGTGACGCCGTCACTTACACTGA 21030
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| || ||||| ||||| | |||||||| |||| | |||||
Sbjct 21029 GCACGCCAAGCGCAAGACCGTTACCTCGTTGGATGTTGTCTATGCTCTGAAGAGACAAGG 20970
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| || |||||
Sbjct 20969 TCGCACCCTGTACGGTTTCGGTGGTTAA 20942
>seq519
Length=16622
Score = 105 bits (116), Expect = 1e-18
Identities = 82/95 (86%), Gaps = 2/95 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| |||||| || ||||| || || || |||||||| ||||
Sbjct 7535 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAACATTCAGGGCATTACCAAGCCCGCTA 7477
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525
|||||||||| |||||||||||||| |||||||||
Sbjct 7476 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 7442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074050716101
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |