Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03-
03] 1,257 sequences; 26,782,037 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq59 86.0 6e-12
>seq59
Length=73848
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||| || || || || | |||| || ||||||||||| |||||||| || ||
Sbjct 15478 ATCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTT 15537
Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| || || || |||| || | |||||| || ||||| || ||||| ||||
Sbjct 15538 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTAAT 15597
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||| || || ||||| || || || ||||| ||||||
Sbjct 15598 CGTCTTACCCGTTAGGGTCTTGACGAAAATCTGCATC 15634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451996097899720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |