Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq443 96.9 3e-14 >seq443 Length=20271 Score = 96.9 bits (106), Expect = 3e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041 ||||| | ||||| || || || || ||||||||||||||||| | ||||||||||| Sbjct 2701 AAAATTGACATTGTTGTTGCTACGATTGCATTTGGTATGGGTATCGACAAACCGGATGTC 2642 Query 367042 AGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGT 367101 | ||||||||||| ||| ||| |||| | | || || ||||| ||||| | ||| Sbjct 2641 CGCTTTGTTATTCATCATGTTATTCCAAAGAGTCTCGAGGGATATTACCAAGAGACTGGA 2582 Query 367102 AGAGCAGGTCGTGATGGA 367119 | || || ||||||||| Sbjct 2581 CGTGCTGGCCGTGATGGA 2564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780760023519442